Public repository for ShapeMapper 2 releases
☆44Aug 6, 2026Updated this week
Alternatives and similar repositories for shapemapper2
Users that are interested in shapemapper2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Nov 11, 2022Updated 3 years ago
- RNA Structural Covariation Above Phylogenetic Expectation☆24Updated this week
- SHAPE-guided RNA structural homology search☆12Aug 12, 2025Updated 11 months ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- Package for analyzing RNA crosslinking and proximity ligation data (PARIS and beyond)☆13Mar 7, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Analysis pipeline for RNA structural probing mutational profiling data sequenced on Nanopore devices☆11Feb 10, 2024Updated 2 years ago
- Deconvolution of RNA Alternative COnformations☆15Jun 24, 2026Updated last month
- Rapid mining of RNA structure motifs from profiling data.☆14Oct 20, 2021Updated 4 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆51Updated this week
- icSHAPE pipeline☆32Oct 1, 2015Updated 10 years ago
- Very flexible tools for plotting and analyzing all kinds of RNA structure data☆16Jul 31, 2026Updated last week
- the analysis script for PrismNet☆10May 17, 2020Updated 6 years ago
- A useful tool for shuffling biological sequences while preserving the k-let counts☆14Apr 23, 2024Updated 2 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆84Jul 19, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Nov 5, 2020Updated 5 years ago
- isoCirc☆10Nov 27, 2023Updated 2 years ago
- ☆14Apr 22, 2021Updated 5 years ago
- Sweep-line algorithm for genomic features. Detect overlaps on large files w/ minimal memory.