dincarnato / SHAPEwarpView external linksLinks
SHAPE-guided RNA structural homology search
☆12Aug 12, 2025Updated 6 months ago
Alternatives and similar repositories for SHAPEwarp
Users that are interested in SHAPEwarp are comparing it to the libraries listed below
Sorting:
- Deconvolution of RNA Alternative COnformations☆14Updated this week
- icSHAPE pipeline☆31Oct 1, 2015Updated 10 years ago
- Package for analyzing RNA crosslinking and proximity ligation data (PARIS and beyond)☆12Mar 7, 2024Updated last year
- StructureFold2☆12Jun 25, 2022Updated 3 years ago
- Public repository for ShapeMapper 2 releases☆41Jan 2, 2026Updated last month
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆44Jan 15, 2026Updated 3 weeks ago
- ☆20Jul 16, 2024Updated last year
- Centroid RNA package☆19Oct 12, 2020Updated 5 years ago
- Integrative Python library for RNA Secondary Structure Analysis☆20Mar 26, 2025Updated 10 months ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆20Nov 11, 2022Updated 3 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆13Jul 12, 2024Updated last year
- Pipeline to calculate icSHAPE score in genome with sliding window strategy☆12Aug 23, 2022Updated 3 years ago
- the analysis script for PrismNet☆10May 17, 2020Updated 5 years ago
- ☆13Apr 22, 2022Updated 3 years ago
- 配合 BaziEval 服用更佳☆14Jan 18, 2019Updated 7 years ago
- Pathogenic Predictor of Deep-Intronic Variants causing Aberrant Splicing☆10Apr 28, 2025Updated 9 months ago
- 一个简单，强大的广告活动弹窗控件☆10Aug 22, 2016Updated 9 years ago
- A bash script creating an Eisenhower matrix on the terminal using tmux and TaskWarrior.☆10Feb 7, 2016Updated 10 years ago
- A BPMN engine. A WASM variant of lib-bpmn-engine. Playground and Showcase interactive BPMN modelling and execution.☆15Aug 30, 2023Updated 2 years ago
- Very flexible tools for plotting and analyzing all kinds of RNA structure data☆15Feb 6, 2026Updated last week
- Effective Attention Sheds Light On Interpretability - Findings of ACL2021☆11May 16, 2021Updated 4 years ago
- Bayesian modelling approach for detecting RNA flexibility changes in high-throughput structure probing data under different conditions, b…☆11Dec 8, 2022Updated 3 years ago
- Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi☆12Jan 8, 2026Updated last month
- 基于ijkplayer的视频播放列表，支持列表播放、全屏播放（加减声音、进度条）、经典viewpage+fragment组合的列表播放、正在播放视频拖动到不可见区域小窗口播放、无缝列表页进播放继续播放☆13Sep 2, 2016Updated 9 years ago
- Risk management for Dual Finance protocol DIP positions☆13Feb 14, 2024Updated 2 years ago
- Enables you to use the Node templating engine Jade for Bootstrap by delivering a layout.jade file☆67Feb 13, 2014Updated 12 years ago
- ☆10Oct 19, 2022Updated 3 years ago
- ☆10Jun 24, 2016Updated 9 years ago
- Alpha version of web-uploaded platform for desktop and mobile. http://fablabtaipei.github.io/FabDoc-alpha/☆10Feb 17, 2016Updated 9 years ago
- Analysis of RNA epitranscriptome sequencing data with affinity-based shotgun sequencing approach☆10Apr 2, 2020Updated 5 years ago
- A Nextflow DSL2 pipeline to perform ribo-seq data analysis and comprehensive quality control.☆19Dec 12, 2025Updated 2 months ago
- Draw RNA secondary structures in python.☆49Jun 24, 2025Updated 7 months ago
- Code for WJ Turkel & A MacEachern, The Programming Historian, 1st ed.☆18Jun 16, 2013Updated 12 years ago
- ☆12Sep 23, 2023Updated 2 years ago
- ☆15Mar 25, 2018Updated 7 years ago
- APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approach…☆12Dec 2, 2024Updated last year
- Evolutionary Multiobjective Optimization Implementation in C++11☆11Aug 8, 2024Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 2 years ago
- A proxy for sending requests to the Apple Push Notification Service☆21Jan 19, 2023Updated 3 years ago