Alternatives and similar repositories for RNArtistCore:

Users that are interested in RNArtistCore are comparing it to the libraries listed below

• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆38Updated 3 weeks ago
• Weeks-UNC / shapemapper2
  Public repository for ShapeMapper 2 releases
  ☆34Updated 3 months ago
• santiago1234 / iCodon
  iCodon customizes gene expression based on the codon composition
  ☆15Updated last year
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆24Updated 11 months ago
• gpp-rnd / rs3
  Package to Score Sequences using Rule Set 3
  ☆11Updated last year
• AnimaTardeb / G4Hunter
  G4Hunter (2012_2015)- IECB - Bordeaux
  ☆13Updated 4 years ago
• BackofenLab / GraphClust-2
  A pipeline for structural clustering of RNA secondary structures
  ☆15Updated 3 years ago
• mckennalab / Circuitseq
  Nanopore Plasmid Sequencing
  ☆32Updated last year
• hsinnan75 / GSAlign
  GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison
  ☆57Updated 11 months ago
• gladstone-institutes / Interactive-Enrichment-Analysis
  A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
  ☆28Updated 2 weeks ago
• uubram / RTCR
  A pipeline for complete and accurate recovery of TCR repertoires from high throughput sequencing data.
  ☆22Updated last year
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆69Updated 3 years ago
• snugel / cas-offinder
  An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.
  ☆90Updated 2 years ago
• eturro / mmseq
  Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads
  ☆68Updated last year
• EddyRivasLab / infernal
  RNA secondary structure/sequence profiles for homology search and alignment
  ☆106Updated 4 months ago
• Kuanhao-Chao / splam
  ✂️ Deep learning-based splice site predictor that improves spliced alignments
  ☆48Updated last month
• pinellolab / PrimeDesign
  Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!
  ☆23Updated 2 years ago
• pinellolab / AmpUMI
  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)
  ☆41Updated 10 months ago
• liguowang / cpgtools
  Python package to analyze DNA methylation data
  ☆41Updated 4 months ago
• mikessh / migmap
  HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
  ☆52Updated 5 months ago
• jsh58 / NGmerge
  Merging paired-end reads and removing adapters
  ☆44Updated 2 weeks ago
• nf-core / rnavar
  gatk4 RNA variant calling pipeline
  ☆45Updated last week
• etirouthier / keras_dna
  ☆23Updated 4 years ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆40Updated 8 years ago
• althonos / lightmotif
  A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
  ☆43Updated 3 weeks ago
• jrderuiter / pybiomart
  A simple pythonic interface to biomart.
  ☆55Updated 5 years ago
• sanderlab / AlignmentViewer2.0
  ☆22Updated 10 months ago
• dbikard / genomenotebook
  A genome browser in your Jupyter notebook
  ☆30Updated 3 months ago
• tsailabSJ / guideseq
  Analysis pipeline for the GUIDE-seq assay.
  ☆24Updated last month
• sequana / sequana
  Sequana: a set of Snakemake NGS pipelines
  ☆146Updated last month