A Kotlin DSL to create and plot RNA 2D structures. The drawing engine behind RNArtist to be used from the command line.
☆30Jan 16, 2025Updated last year
Alternatives and similar repositories for RNArtistCore
Users that are interested in RNArtistCore are comparing it to the libraries listed below
Sorting:
- With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...☆177Nov 24, 2023Updated 2 years ago
- RNA Structural Covariation Above Phylogenetic Expectation☆18Dec 12, 2025Updated 2 months ago
- An R package to process and analyze transcriptomic data☆19Jun 18, 2025Updated 8 months ago
- 🧪 Optimized protocol for m6A-SAC-seq☆11Jun 16, 2025Updated 8 months ago
- ☆20Jul 16, 2024Updated last year
- The tRNA adaptation index☆19Apr 25, 2025Updated 10 months ago
- Centroid RNA package☆19Oct 12, 2020Updated 5 years ago
- This project contains the basic info about how to log the Client request and the **Response Time taken** by the request on the server and…☆18May 17, 2017Updated 8 years ago
- A container for the forna visualization software.☆21May 30, 2024Updated last year
- An RNA manipulation library.☆56Feb 16, 2024Updated 2 years ago
- splicing and feature maps for RBPs☆25Apr 19, 2022Updated 3 years ago
- Template-based RNA secondary structure visualization☆27Nov 20, 2024Updated last year
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆184Updated this week
- Alignment-based gene expression quantification☆35Feb 8, 2026Updated 3 weeks ago
- JSON-based FON (Feature Object Notation) format and tools to simplify genomic annotations usage☆13Jun 11, 2025Updated 8 months ago
- python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.☆35Feb 1, 2024Updated 2 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Apr 25, 2023Updated 2 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆81Feb 7, 2026Updated 3 weeks ago
- This module includes functions that can be used to simulate mechanochemical phenomena.☆11Nov 16, 2021Updated 4 years ago
- Public repository for ShapeMapper 2 releases☆41Jan 2, 2026Updated last month
- A fast and accurate RNA secondary structure, end-to-end approach prediction method.☆12Jan 2, 2025Updated last year
- A local realigner around InDels for MethylSeq data☆12Apr 28, 2016Updated 9 years ago
- Python implementation of TEISER also capable of using SHAPE structural probing data☆12Jan 7, 2025Updated last year
- OpenSMOG is a Python library for performing molecular dynamics simulations using Structure-Based Models. OpenSMOG uses OpenMM.☆12Feb 20, 2026Updated last week
- webfilte和exceptionHandler实现☆12Dec 20, 2018Updated 7 years ago
- ☆10Dec 4, 2021Updated 4 years ago
- A flexible and fast sgRNA counter from FASTQ Files☆11Dec 29, 2025Updated 2 months ago
- ☆10Jan 19, 2019Updated 7 years ago
- NEFF Calculator and MSA File Converter☆13Sep 16, 2025Updated 5 months ago
- Visual Molecular Dynamics in Docker Container☆12Jan 1, 2015Updated 11 years ago
- qFit: Automated and unbiased multi-conformer models from X-ray and EM maps.☆47Feb 16, 2026Updated last week
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆45Feb 10, 2026Updated 2 weeks ago
- A command line application to launch molecular dynamics simulations with OpenMM☆40Apr 7, 2022Updated 3 years ago
- Structural space exploration of AlphaFold DB☆12Oct 8, 2021Updated 4 years ago
- Regular Invariant Generator and SMTLIB2 code transformer☆13Aug 8, 2022Updated 3 years ago
- ☆12Feb 9, 2026Updated 2 weeks ago
- ☆11Apr 10, 2024Updated last year
- A Scala.js interface to Mapbox and related APIs, like Leaflet.js.☆11Apr 3, 2017Updated 8 years ago
- Code repository for our work on Quantum Pi☆10Jun 4, 2024Updated last year