mariodosreis / taiLinks
The tRNA adaptation index
☆19Updated 9 months ago
Alternatives and similar repositories for tai
Users that are interested in tai are comparing it to the libraries listed below
Sorting:
- RNA secondary structure/sequence profiles for homology search and alignment☆122Updated last month
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆43Updated last week
- Associated code for EvoWeaver publication☆16Updated 8 months ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 7 months ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- iCodon customizes gene expression based on the codon composition☆15Updated 2 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆17Updated 5 years ago
- Metagenome analysis using the Kraken software suite☆36Updated 3 years ago
- Fast and flexible ORF finder☆77Updated 4 years ago
- Deep learning embedding for nucleotide sequences☆19Updated 10 months ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 3 years ago
- MGnify genome analysis pipeline☆108Updated 2 weeks ago
- ☆14Updated 7 years ago
- A simple command-line tool to download data from Joint Genome Institute databases☆51Updated 3 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆95Updated 3 years ago
- Machine-learning-based general bacterial promoter prediction tool.☆53Updated 2 years ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- A tool for scanning FASTA protein sequences against a library of Pfam HMMs☆24Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆50Updated 2 weeks ago
- sensitive and precise assembly of short sequencing reads☆163Updated last year
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆24Updated 2 months ago
- ORFFinder in Python☆15Updated last year
- ☆133Updated last year
- This repository contains Docker files for the images maintained by the Phenotypic Evolution Group at the Institute for Molecular and Cell…☆54Updated last week
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆63Updated 5 years ago
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆66Updated 10 months ago
- A Pure-Python parser of HMMER3 output☆18Updated last year
- A transmembrane helix finder in Python 3.☆41Updated 2 years ago
- This project proposes to contribute to fill the knowledge gap about Covid-19SARS-CoV-2 in Brazil and with the global knowledge about the …☆14Updated 2 years ago