dincarnato / RNAFrameworkLinks
RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
☆42Updated last week
Alternatives and similar repositories for RNAFramework
Users that are interested in RNAFramework are comparing it to the libraries listed below
Sorting:
- The tRNA adaptation index☆18Updated 6 months ago
- Comprehensive Python client for the Uniprot REST API☆52Updated 2 weeks ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆75Updated 3 months ago
- ☆70Updated 8 months ago
- Absolute quantification package based on quantms.io☆16Updated last month
- G4Hunter (2012_2015)- IECB - Bordeaux☆16Updated 5 years ago
- ☆80Updated 2 years ago
- HLA-II ligand predictor.☆45Updated 2 years ago
- Multi-class signal peptide prediction and structure decoding model.☆95Updated 8 months ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Tool for deep mutational scanning experiments.☆54Updated 7 months ago
- An RNA manipulation library.☆56Updated last year
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …☆17Updated 2 years ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆156Updated 10 months ago
- HLA-I ligand predictor☆43Updated last month
- Protein 3D structure prediction pipeline☆86Updated last week
- A high-fidelity E. coli RNA-seq compendium☆33Updated 4 years ago
- Template-based RNA secondary structure visualization☆26Updated 11 months ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆47Updated last week
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆94Updated 3 years ago
- Fast and flexible ORF finder☆76Updated 3 years ago
- Associated code for EvoWeaver publication☆15Updated 5 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆69Updated this week
- ☆35Updated 3 months ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆20Updated 2 years ago
- off-targeting assessment of Cas9 gRNAs☆15Updated 4 years ago
- RNA secondary structure/sequence profiles for homology search and alignment☆115Updated 11 months ago
- Deep learning embedding for nucleotide sequences☆19Updated 7 months ago