PHAGES2050 - a Comprehensive AI-based Framework for Phage Research & Therapy
☆36May 23, 2023Updated 3 years ago
Alternatives and similar repositories for PHAGES2050
Users that are interested in PHAGES2050 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Sep 19, 2019Updated 6 years ago
- A python library for predicting phage lifestyle based on genome sequence☆42Aug 9, 2023Updated 3 years ago
- Fast genealogical relationship evaluation of bacterial isolates with WGS data.☆12Jan 17, 2022Updated 4 years ago
- A Python API and a command-line tool for the Tree of Life☆18Aug 28, 2020Updated 6 years ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- An app for qualitative text analysis with large language models (LLMs) / Een app voor kwalitatieve tekstanalyse met large language models…☆18Aug 7, 2026Updated 3 weeks ago
- Software for Nanopore Analysis☆10Mar 14, 2018Updated 8 years ago
- ☆20Nov 17, 2022Updated 3 years ago
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated last year
- Read nanopore sequence reads in real-time☆14Feb 9, 2017Updated 9 years ago
- Simple script to generate whole-genome coverage plots☆19Jun 23, 2015Updated 11 years ago
- https://grasp.ufv.br/☆17Jul 6, 2023Updated 3 years ago
- add true-negative SVs from a population callset to a truth-set.☆14Jun 17, 2022Updated 4 years ago
- ☆16Jan 10, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Browser for ExAC consortium data☆11Oct 23, 2017Updated 8 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆15Mar 14, 2024Updated 2 years ago
- A mini course on biological data analysis☆10Jan 16, 2025Updated last year
- Library for indexing VCF files for random access searches by rsID☆17Mar 2, 2026Updated 5 months ago
- A Boolean Algebra for Genetic Variants☆14Aug 24, 2026Updated last week
- This is the Github repository containing the code for the Context-Aware Sequential Recommendation project for the Information Retrieval 2…☆11Mar 24, 2023Updated 3 years ago
- The documentation for the Clustergrammer project☆10Oct 21, 2020Updated 5 years ago
- The Loss-of-Function ToolKit (LoFTK) allows efficient and automated prediction of LoF variants from both genotyped and sequenced genomes,…☆10Jul 30, 2025Updated last year
- Throughput PhATE processing of draft or finished phage genomes☆14Apr 19, 2021Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A python tool for parsing pedigree files☆16Aug 29, 2017Updated 9 years ago
- A tool to easily create informative genomic feature plots☆17Dec 26, 2022Updated 3 years ago
- A tool for identifying active prophage elements through read mapping☆14Oct 9, 2023Updated 2 years ago
- A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.☆50Jul 12, 2022Updated 4 years ago
- Code and database related to our manuscript "Predicting bacteriophage hosts based on receptor-binding proteins"☆13Nov 2, 2023Updated 2 years ago
- Blazingly fast, streaming duplicate detection for NGS data☆21Updated this week
- A simple, multithreaded image scraper implemented in Python for downloading all images from the Flickr web service for a given keyword an…☆15Feb 12, 2017Updated 9 years ago
- DTITR: End-to-End Drug-Target Binding Affinity Prediction with Transformers☆15Nov 8, 2023Updated 2 years ago
- ☆18Apr 21, 2026Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Software for the 2015 Waterloo iGEM Team☆11Oct 19, 2015Updated 10 years ago
- Bacterial phylogenetics in BEAST 2.☆18Mar 30, 2023Updated 3 years ago
- Strain resolved metagenome simulator☆13Aug 11, 2018Updated 8 years ago
- Parser for Ghost Koala☆10Aug 23, 2018Updated 8 years ago
- Pairwise machine learning models for phage-host interaction prediction☆22Jun 23, 2024Updated 2 years ago
- De novo assembly of nanopore reads using nextflow☆20Aug 5, 2020Updated 6 years ago
- We present Envision, an accurate predictor of protein variant molecular effect, trained using large-scale experimental mutagenesis data. …☆20Jan 5, 2018Updated 8 years ago