igem-waterloo / uwaterloo-igem-2015Links
Software for the 2015 Waterloo iGEM Team
☆11Updated 9 years ago
Alternatives and similar repositories for uwaterloo-igem-2015
Users that are interested in uwaterloo-igem-2015 are comparing it to the libraries listed below
Sorting:
- Mapping NCBI Genbank accession to GTDB accession☆13Updated 4 years ago
- Align short reads against viral genomes in protein space☆10Updated 7 years ago
- The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service component…☆11Updated 5 years ago
- blast, shmlast☆21Updated 4 years ago
- Tools for phylogenetic data analysis including visualization and cluster-computing support.☆14Updated 3 years ago
- mreps: software for tandem repeat identification in DNA☆15Updated 5 years ago
- Color DNA/RNA bases in terminal output☆21Updated 8 years ago
- the Metagenomic test for Presence Or Absence of Pathways☆13Updated 6 years ago
- Build sourmash databases for genbank.☆11Updated 2 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Real-time species-typing visualisation for nanopore data.☆13Updated 2 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- Viral genome coverage evaluation for metagenomic diagnostics☆27Updated last month
- reference free variant assembly☆34Updated 2 years ago
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Updated 6 years ago
- ☆16Updated 2 years ago
- A place to put docker build files☆13Updated last year
- Extremely accurate algorithm used to group DNA sequences from microbial communities into operational taxonomic units (proxy for species) …☆14Updated 6 years ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆31Updated 8 months ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Updated 6 years ago
- Simulate mutations in genomes☆15Updated 5 years ago
- ☆18Updated 8 years ago
- Utility program for extracting sequences from a fasta/fastq file☆35Updated 9 months ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- Plot tanglegrams from two dendrograms☆20Updated 6 months ago
- in silico plasmid extraction☆13Updated 8 years ago
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ☆11Updated 8 years ago