pimentel / deep_learning_papersLinks
A place to collect papers that are related to deep learning and computational biology
☆186Updated 9 years ago
Alternatives and similar repositories for deep_learning_papers
Users that are interested in deep_learning_papers are comparing it to the libraries listed below
Sorting:
- Convolutional neural network analysis for predicting DNA sequence activity.☆260Updated 4 years ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61Updated 9 years ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆261Updated last year
- Deep neural networks for predicting CpG methylation☆146Updated 5 years ago
- Kipoi's model zoo API☆236Updated last year
- Model zoo for genomics☆167Updated 11 months ago
- A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences☆158Updated 8 years ago
- Deep learning for gene expression inference☆145Updated 6 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Updated 6 years ago
- a framework for training sequence-level deep learning networks☆383Updated 6 months ago
- Deep learning for identifying cis-regulatory elements and other applications☆33Updated 8 years ago
- scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources…☆106Updated 2 years ago
- A SingleCell RNASeq pre-processing snakemake workflow☆149Updated 2 years ago
- Review Paper: Deep Learning for Genomics: A Concise Overview☆75Updated 7 years ago
- Bioconductor cheat sheet☆189Updated 10 months ago
- R package for analyzing single-cell RNA-seq data☆175Updated last year
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 7 years ago
- Code, examples, reading list for JHU Frontiers of Sequencing Data Analysis class☆25Updated 11 years ago
- The Leek group guide to genomics papers☆489Updated 6 years ago
- ☆107Updated 7 years ago
- Batch effects and the effective design of single-cell gene expression studies☆102Updated 5 years ago
- Wishbone is an algorithm to align cells along developmental trajectories with branches☆42Updated 5 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 6 years ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 5 years ago
- Provide R access to the NCI Genomic Data Commons portal.☆89Updated last month
- Lists open source machine learning projects solving genomic or molecular biology problems.☆29Updated 8 years ago
- Differential analysis of RNA-Seq☆304Updated 3 weeks ago
- A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.☆314Updated 3 months ago
- awesome-bio-datasets☆233Updated 7 years ago
- Statistics course for JHU Genomic Data Science Sequence☆158Updated 9 years ago