pimentel / deep_learning_papers
A place to collect papers that are related to deep learning and computational biology
☆185Updated 8 years ago
Related projects: ⓘ
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆62Updated 8 years ago
- Convolutional neural network analysis for predicting DNA sequence activity.☆254Updated 4 years ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆253Updated last year
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- Kipoi's model zoo API☆231Updated 4 months ago
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- A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences☆155Updated 7 years ago
- a framework for training sequence-level deep learning networks☆374Updated 2 months ago
- Code and examples for JHU Computational Genomics class☆288Updated 2 years ago
- Visual Machine Learning of Genome-Phenome Associations☆22Updated last year
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆44Updated 5 years ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 4 years ago
- The Leek group guide to genomics papers☆467Updated 5 years ago
- ☆103Updated this week
- Wishbone is an algorithm to align cells along developmental trajectories with branches☆41Updated 4 years ago
- scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources…☆104Updated last year
- Flexible Integration of Data with Deep LEarning☆50Updated last year
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 6 years ago
- Deep learning for identifying cis-regulatory elements and other applications☆32Updated 7 years ago
- ☆106Updated 6 years ago
- DCell browser and gene deletion simulator☆119Updated last year
- List of gene lists for genomic analyses.☆215Updated 2 years ago
- NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection☆167Updated 2 years ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆121Updated last year
- A SingleCell RNASeq pre-processing snakemake workflow☆147Updated last year
- For anyone who are eager to applying deep learning in bioinformatics!☆116Updated 5 years ago
- Multi-Omics Factor Analysis☆231Updated 3 years ago
- R package for analyzing single-cell RNA-seq data☆172Updated 6 months ago
- Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning app…☆168Updated 2 years ago