jmschrei / rambutanLinks
Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.
☆21Updated 7 years ago
Alternatives and similar repositories for rambutan
Users that are interested in rambutan are comparing it to the libraries listed below
Sorting:
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 3 years ago
- DSDE Deep Learning Club☆40Updated 6 years ago
- Deep Feature Interaction Maps (DFIM)☆54Updated 6 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 6 years ago
- Repository for the code for DeepATAC project presented at WCB workshop in ICML2017☆22Updated 8 years ago
- A deep learning package for predicting TF binding☆42Updated 6 years ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61Updated 9 years ago
- ☆20Updated 10 years ago
- Computational biology utility scripts☆19Updated 9 months ago
- ☆36Updated 8 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Updated 10 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 6 months ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 8 years ago
- Deep learning for identifying cis-regulatory elements and other applications☆34Updated 9 years ago
- Understanding sequence conservation with deep learning☆20Updated 8 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Updated 8 years ago
- Software for exploration of gene expression data from single-cell RNA sequencing.☆28Updated 6 years ago
- Tools for munging genomic data☆21Updated 6 years ago
- Ranked vaccine peptides for personalized cancer immunotherapy☆60Updated this week
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- An unsupervised transfer learning approach for rare disease transcriptomics☆46Updated 6 years ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16Updated 11 years ago
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago
- ☆11Updated 8 years ago
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆27Updated 6 years ago
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆34Updated 8 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using Python and IPython Notebooks.☆54Updated 6 years ago
- Wishbone is an algorithm to align cells along developmental trajectories with branches☆42Updated 5 years ago
- Representation Learning for detection of phenotype-associated cell subsets☆66Updated 5 years ago