A collaboratively written review paper on deep learning, genomics, and precision medicine
☆1,273Dec 25, 2022Updated 3 years ago
Alternatives and similar repositories for deep-review
Users that are interested in deep-review are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A curated list of awesome deep learning applications in the field of computational biology☆1,974Nov 7, 2021Updated 4 years ago
- A list of deep learning implementations in biology☆2,136Mar 4, 2026Updated 2 months ago
- A place to collect papers that are related to deep learning and computational biology☆189Feb 13, 2016Updated 10 years ago
- Kipoi's model zoo API☆242Dec 17, 2025Updated 4 months ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆264Aug 1, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.☆3,691Mar 19, 2026Updated last month
- Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology☆6,709Mar 2, 2026Updated 2 months ago
- Python and C++ code for reading and writing genomics data.☆798Dec 9, 2021Updated 4 years ago
- ☆53Feb 26, 2017Updated 9 years ago
- Convolutional nets which can take molecular graphs of arbitrary size as input.☆503Jan 23, 2018Updated 8 years ago
- Denoising Autoencoders for Phenotype Stratification☆42Nov 9, 2018Updated 7 years ago
- Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.☆3,722May 2, 2026Updated last week
- Deep learning for gene expression inference☆145Feb 18, 2019Updated 7 years ago
- Cloud-native genomic dataframes and batch computing☆1,056Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Standardized data set for machine learning of protein structure☆914Nov 18, 2020Updated 5 years ago
- a framework for training sequence-level deep learning networks☆399Dec 16, 2024Updated last year
- Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl☆401Apr 23, 2026Updated 2 weeks ago
- Autoencoder network for learning a continuous representation of molecular structures.☆531Aug 2, 2024Updated last year
- Model zoo for genomics☆174Dec 17, 2025Updated 4 months ago
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences☆160Jan 14, 2017Updated 9 years ago
- A curated list of awesome Bioinformatics libraries and software.☆4,009Apr 7, 2026Updated last month
- A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.☆327Mar 6, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ULMFiT for Genomic Sequence Data☆286Nov 15, 2019Updated 6 years ago
- Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis☆1,029Aug 24, 2024Updated last year
- Flexible Integration of Data with Deep LEarning☆51Mar 24, 2023Updated 3 years ago
- predicting expression effects of human genome variants ab initio from sequence☆135Jan 28, 2025Updated last year
- List of software packages for multi-omics analysis☆926Apr 17, 2026Updated 3 weeks ago
- The Leek group guide to genomics papers☆502Nov 5, 2018Updated 7 years ago
- Tools to process and analyze deep sequencing data.☆759Jul 23, 2025Updated 9 months ago
- Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.☆83Dec 10, 2020Updated 5 years ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61May 26, 2016Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Avocado is a multi-scale deep tensor factorization model that learns a latent representation of the human epigenome and enables imputatio…☆120Mar 17, 2022Updated 4 years ago
- Deep count autoencoder for denoising scRNA-seq data☆271Mar 21, 2024Updated 2 years ago
- Convolutional neural network analysis for predicting DNA sequence activity.☆267Sep 14, 2020Updated 5 years ago
- Deep neural networks for predicting CpG methylation☆152Sep 30, 2019Updated 6 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Apr 19, 2019Updated 7 years ago
- Ten Quick Tips for Deep Learning in Biology☆225Nov 30, 2021Updated 4 years ago
- Single-cell analysis in Python. Scales to >100M cells.☆2,441Updated this week