A collaboratively written review paper on deep learning, genomics, and precision medicine
☆1,284Dec 25, 2022Updated 3 years ago
Alternatives and similar repositories for deep-review
Users that are interested in deep-review are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A curated list of awesome deep learning applications in the field of computational biology☆1,992Nov 7, 2021Updated 4 years ago
- A list of deep learning implementations in biology☆2,161Sep 12, 2026Updated last month
- A place to collect papers that are related to deep learning and computational biology☆189Feb 13, 2016Updated 10 years ago
- Kipoi's model zoo API☆243Dec 17, 2025Updated 10 months ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆264Aug 1, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.☆3,823Sep 30, 2026Updated 2 weeks ago
- Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology☆7,065Aug 20, 2026Updated last month
- Python and C++ code for reading and writing genomics data.☆803Dec 9, 2021Updated 4 years ago
- ☆53Feb 26, 2017Updated 9 years ago
- Convolutional nets which can take molecular graphs of arbitrary size as input.☆500Jan 23, 2018Updated 8 years ago
- Deep learning for gene expression inference☆149Feb 18, 2019Updated 7 years ago
- Standardized data set for machine learning of protein structure☆921Nov 18, 2020Updated 5 years ago
- Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.☆3,877Updated this week
- Denoising Autoencoders for Phenotype Stratification☆42Nov 9, 2018Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Cloud-native genomic dataframes and batch computing☆1,080Updated this week
- a framework for training sequence-level deep learning networks☆400Dec 16, 2024Updated last year
- Model zoo for genomics☆175Dec 17, 2025Updated 10 months ago
- Autoencoder network for learning a continuous representation of molecular structures.☆532Aug 2, 2024Updated 2 years ago
- Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl☆410Updated this week
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- A curated list of awesome Bioinformatics libraries and software.☆4,320Sep 27, 2026Updated 2 weeks ago
- A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences☆164Jan 14, 2017Updated 9 years ago
- ULMFiT for Genomic Sequence Data☆287Nov 15, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis☆1,030Aug 24, 2024Updated 2 years ago
- A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.☆340May 18, 2026Updated 5 months ago
- predicting expression effects of human genome variants ab initio from sequence☆139Jan 28, 2025Updated last year
- Flexible Integration of Data with Deep LEarning☆51Mar 24, 2023Updated 3 years ago
- The Leek group guide to genomics papers☆504Nov 5, 2018Updated 7 years ago
- List of software packages for multi-omics analysis☆947Aug 4, 2026Updated 2 months ago
- Tools to process and analyze deep sequencing data.☆769Updated this week
- Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.☆83Dec 10, 2020Updated 5 years ago
- Deep neural networks for predicting CpG methylation☆155Sep 30, 2019Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Ten Quick Tips for Deep Learning in Biology☆224Nov 30, 2021Updated 4 years ago
- Deep probabilistic analysis of single-cell and spatial omics data☆1,713Updated this week
- Applied Computational Genomics Course at UU: Spring 2020☆1,132Apr 5, 2024Updated 2 years ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61May 26, 2016Updated 10 years ago
- Avocado is a multi-scale deep tensor factorization model that learns a latent representation of the human epigenome and enables imputatio…☆122Mar 17, 2022Updated 4 years ago
- Convolutional neural network analysis for predicting DNA sequence activity.☆269Sep 14, 2020Updated 6 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Apr 19, 2019Updated 7 years ago