nolanlab / citrusLinks
Citrus Development Code
☆31Updated last year
Alternatives and similar repositories for citrus
Users that are interested in citrus are comparing it to the libraries listed below
Sorting:
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆48Updated 6 years ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 9 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 8 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 5 years ago
- easy access to benchmark datasets☆50Updated 7 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆31Updated 3 weeks ago
- R package to identify genes with differential distributions in single-cell RNA-seq☆33Updated 3 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 2 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data☆45Updated 8 years ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- A package that provides data analysis pipeline for flow cytometry.☆79Updated 3 weeks ago
- R package for differential discovery analyses in high-dimensional cytometry data☆21Updated 7 months ago
- Normalization for single cell RNA-seq data☆48Updated 3 months ago
- An R package to construct Elastic Principal Graphs☆23Updated 5 years ago
- Topics In Data Science and Bioinformatics☆79Updated last year
- BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/pa…☆84Updated last week
- ☆62Updated 6 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 weeks ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 2 years ago
- ☆95Updated last year
- consistent quantification of external RNA-seq data sets☆58Updated last year
- R package of techniques for comparing clusterings of single-cell sequencing data☆40Updated last year
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆106Updated 2 years ago
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆105Updated 2 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 11 months ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 6 years ago
- ☆55Updated 7 months ago