RGLab / FAUSTLinks
Full annotation using shape-constrained trees
☆28Updated 2 years ago
Alternatives and similar repositories for FAUST
Users that are interested in FAUST are comparing it to the libraries listed below
Sorting:
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated this week
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- Experimental design framework for scRNAseq population studies (eQTL and DE)☆46Updated last year
- ☆44Updated last year
- ☆12Updated last year
- ☆26Updated 8 months ago
- Explore the cancer relevance of your gene list☆52Updated last month
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆26Updated last year
- Normalize CITEseq Data☆67Updated 2 months ago
- Single-cell Scalable Visualization and Analytics☆27Updated 6 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 weeks ago
- Collection of useful methods for single cell analysis☆15Updated last year
- ☆37Updated 2 weeks ago
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆54Updated last year
- ☆43Updated 5 years ago
- ☆38Updated 4 months ago
- Signac☆26Updated 2 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆29Updated 2 years ago
- CAusal Reasoning for Network Identification with integer VALue programming in R☆61Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆78Updated last month
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- Using BCR and expression for sequence embedding☆25Updated last month
- supporting code for the multinomial single cell RNA-Seq paper☆53Updated 5 years ago
- ☆43Updated 2 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- Single cell type annotation guided by cell atlases, with freedom to be queer☆25Updated 3 years ago
- RNA velocity validation☆22Updated 3 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago