RGLab / FAUST
Full annotation using shape-constrained trees
☆25Updated last year
Alternatives and similar repositories for FAUST:
Users that are interested in FAUST are comparing it to the libraries listed below
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 2 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆19Updated 2 years ago
- Inferring gene co-expression networks from single cell gene expression data☆24Updated 2 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 5 years ago
- Bead-based single-cell atac processing☆31Updated 3 years ago
- Explore the cancer relevance of your gene list☆49Updated 5 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- ☆38Updated 4 years ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Updated 5 years ago
- ☆12Updated 9 months ago
- An analytics package for single cell data☆22Updated 2 years ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated last year
- ☆62Updated 3 months ago
- Mean Alterations Using Discrete Expression☆14Updated 10 months ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆26Updated 3 years ago
- GWAS gold standards repository☆31Updated last year
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆47Updated 4 years ago
- post-clustering differential expression test☆35Updated 5 years ago
- Dynamic models for single-cell RNA-seq time series.☆39Updated 6 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- ☆37Updated 8 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- ☆29Updated last year
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆29Updated 5 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆39Updated 9 months ago
- Collection of useful methods for single cell analysis☆14Updated 5 months ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago