RGLab / FAUSTLinks
Full annotation using shape-constrained trees
☆28Updated 2 years ago
Alternatives and similar repositories for FAUST
Users that are interested in FAUST are comparing it to the libraries listed below
Sorting:
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Updated 6 years ago
- An R Package for Geneset Enrichment Workflows☆78Updated last month
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last week
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- Explore the cancer relevance of your gene list☆52Updated last month
- Single-cell Scalable Visualization and Analytics☆27Updated 6 years ago
- ☆44Updated last year
- ☆26Updated 8 months ago
- ☆12Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- Normalize CITEseq Data☆67Updated 3 months ago
- Trans-association between HLA and TCR-CDR3☆19Updated 2 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 6 years ago
- scRNAseq integration with triplet neural networks☆41Updated this week
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago
- CiteFuse:☆28Updated 3 years ago
- University of Cambridge PhD thesis☆16Updated 5 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆33Updated 5 months ago
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆26Updated last year
- ConsensusTME Gene Sets and R Script☆39Updated last year
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 months ago
- Human brain, >200,000 nuclei☆23Updated 4 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Updated 7 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆29Updated 2 years ago
- Lightweight Iterative Gene set Enrichment in R☆58Updated last year
- ☆38Updated 4 months ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Updated 5 years ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 7 years ago