R package for differential discovery analyses in high-dimensional cytometry data
☆25Jul 14, 2026Updated 2 months ago
Alternatives and similar repositories for diffcyt
Users that are interested in diffcyt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18Apr 17, 2024Updated 2 years ago
- Cytometry dATa anALYsis Tools☆75Apr 28, 2026Updated 5 months ago
- c++ library for representing and interacting the gated cytometry data structure☆14Jan 29, 2025Updated last year
- A GatingML Interface for Cross Platform Cytometry Data Sharing☆34Feb 10, 2026Updated 7 months ago
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo…☆12Aug 30, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆19Mar 15, 2017Updated 9 years ago
- The files and presentation from the Cytometry Core Facility flow cytometry data analysis course in R☆26Sep 6, 2019Updated 7 years ago
- Rphenograph: R implementation of the PhenoGraph algorithm☆54Jun 8, 2020Updated 6 years ago
- ☆39Mar 24, 2023Updated 3 years ago
- ☆26May 7, 2022Updated 4 years ago
- Robust Integration of Single-Cell Cytometry Datasets☆37Apr 29, 2026Updated 5 months ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Dec 9, 2021Updated 4 years ago
- Code for the paper on t-SNE with variable degree of freedom☆25Aug 5, 2020Updated 6 years ago
- R package for working with CyToF data☆26May 11, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SPADE: Spanning Tree Progression of Density Normalized Events☆49Aug 23, 2016Updated 10 years ago
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 11 months ago
- ☆35Sep 23, 2026Updated 2 weeks ago
- Introduction to Python Programming☆11Mar 31, 2020Updated 6 years ago
- Kernel k Nearest Neighbors in R☆17Sep 1, 2026Updated last month
- ☆15Jan 16, 2024Updated 2 years ago
- R package for pre-processing of mass and flow cytometry data☆48Sep 6, 2022Updated 4 years ago
- SCIPAC (Single- Cell and bulk data-based Identifier for Phenotype Associated Cells) is a computational method that identifies cells in si…☆16Jun 30, 2024Updated 2 years ago
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆14Mar 4, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Differential Expression with Capture Efficiency adjustmeNT☆16Jan 3, 2023Updated 3 years ago
- An R package to produce full spectrum flow cytometry plots outside the acquisition software.☆11May 9, 2023Updated 3 years ago
- Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data☆12Jun 30, 2022Updated 4 years ago
- A repo to reproduce the experiments in the YACHT manuscript☆12Nov 2, 2023Updated 2 years ago
- Huge-scale, high-performance flow cytometry clustering in Julia☆36Nov 3, 2025Updated 11 months ago
- Out-of-Core Principal Component Analysis☆19Dec 25, 2017Updated 8 years ago
- Single-Cell Inference of Class Switch Recombination☆25Jun 19, 2026Updated 3 months ago
- Single-cell Consensus Clusters of Encoded Subspaces☆15Jul 27, 2026Updated 2 months ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 10 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A package that provides data analysis pipeline for flow cytometry.☆85Mar 12, 2026Updated 6 months ago
- Faster manipulation of dendrogram objects in R.☆15May 22, 2015Updated 11 years ago
- an R package for deep mining gene co-expression networks in multi-trait expression data☆25Jan 23, 2026Updated 8 months ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 6 months ago
- Marker Enrichment Modeling (MEM)☆13Nov 22, 2021Updated 4 years ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆17Feb 25, 2019Updated 7 years ago
- scaffold☆18Aug 13, 2018Updated 8 years ago