Cytometry dATa anALYsis Tools
☆75Apr 28, 2026Updated 2 months ago
Alternatives and similar repositories for CATALYST
Users that are interested in CATALYST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package for differential discovery analyses in high-dimensional cytometry data☆25Jul 14, 2026Updated last week
- CellProfiler plugins for multiplexed image analysis☆12Feb 16, 2021Updated 5 years ago
- An R package to produce full spectrum flow cytometry plots outside the acquisition software.☆11May 9, 2023Updated 3 years ago
- ☆17Apr 17, 2024Updated 2 years ago
- Citrus Development Code☆31Apr 14, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆61Dec 17, 2020Updated 5 years ago
- ☆25May 7, 2022Updated 4 years ago
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 9 months ago
- Parallel opt-SNE implementation with Python wrapper☆37Jun 23, 2022Updated 4 years ago
- A tutorial for the analysis of high-dimensional flow cytometry data☆28Aug 28, 2019Updated 6 years ago
- Robust Integration of Single-Cell Cytometry Datasets☆36Apr 29, 2026Updated 2 months ago
- an interactive explorer for flow cytometry data☆19Jul 8, 2024Updated 2 years ago
- ☆38Mar 24, 2023Updated 3 years ago
- Flow cytometry analysis workflow. The aim of this project is to provide an intuitive workflow for the analysis of high-dimensionality cyt…☆28Apr 29, 2026Updated 2 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- scaffold☆18Aug 13, 2018Updated 7 years ago
- Marker Enrichment Modeling (MEM)☆13Nov 22, 2021Updated 4 years ago
- flowWorkspace☆48May 27, 2026Updated last month
- Cytofin-an R package for CyTOF data integration☆12Jan 13, 2022Updated 4 years ago
- R package: AutoSpill algorithm for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data☆22Jun 17, 2021Updated 5 years ago
- A GatingML Interface for Cross Platform Cytometry Data Sharing☆35Feb 10, 2026Updated 5 months ago
- c++ library for representing and interacting the gated cytometry data structure☆14Jan 29, 2025Updated last year
- Representation Learning for detection of phenotype-associated cell subsets☆69Oct 24, 2020Updated 5 years ago
- A data-centric flow/mass cytometry automated analysis framework☆43Jan 22, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- R package for visualization of highly multiplexed imaging data☆36Jun 9, 2026Updated last month
- Imaging Mass Cytometry (IMC) file type support for napari☆13Jul 8, 2026Updated 2 weeks ago
- Multi-sample multi-group scRNA-seq analysis tools☆237Jul 6, 2026Updated 2 weeks ago
- R package for pre-processing of mass and flow cytometry data☆48Sep 6, 2022Updated 3 years ago
- R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data☆48Feb 15, 2017Updated 9 years ago
- scDataviz: single cell dataviz and downstream analyses☆67Sep 24, 2021Updated 4 years ago
- An R package for handling and analysing imaging mass cytometry data☆33May 19, 2026Updated 2 months ago
- Worked example showing how to cluster and visualize flow/mass cytometry data using FlowSOM and Rtsne☆17Jan 30, 2017Updated 9 years ago
- R library to normalize cytometry data☆41Jul 7, 2026Updated 2 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Take command of your set enrichment analyses.☆23Updated this week
- Tools for Unmixing Spectral Flow Cytometry Data☆40Updated this week
- ☆12May 14, 2024Updated 2 years ago
- Antique or modern atlas-like depictions of non-linear dimensionality reduction for single cell data☆18Jun 19, 2025Updated last year
- R package for working with CyToF data☆27May 11, 2020Updated 6 years ago
- ☆20May 1, 2023Updated 3 years ago
- Huge-scale, high-performance flow cytometry clustering in Julia☆36Nov 3, 2025Updated 8 months ago