Alternatives and similar repositories for fcm

Users that are interested in fcm are comparing it to the libraries listed below

• johanneskoester / alpaca
  ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algeb…
  ☆23Updated last year
• Edinburgh-Genome-Foundry / BandWagon
  🎺 Plot DNA digestion band patterns with Python
  ☆20Updated 6 months ago
• mengqvist / DNApy
  Code for DNA plasmid editing.
  ☆43Updated 7 years ago
• Novartis / yap
  High throughput, pain-free big data pipelines.
  ☆30Updated 8 years ago
• ajrichards / htsint
  A Python library to work with high-throughput sequencing data in the context of data integration
  ☆14Updated 8 years ago
• dpryan79 / Misc
  Misc. utilities
  ☆11Updated 6 years ago
• mfiers / Moa
  Lightweight workflows in bioinformatics:
  ☆24Updated 11 years ago
• brentp / python-giggle
  python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.
  ☆15Updated 7 years ago
• tiagoantao / pygenomics
  A library for next generation genomics in Python 3
  ☆18Updated 7 years ago
• YeoLab / qtools
  qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python
  ☆21Updated 2 years ago
• conda-incubator / conda-env-builder
  Build and maintain multiple custom conda environments all in one place.
  ☆39Updated 11 months ago
• mattmight / calculendar
  A command line tool that uses a Boolean calculus of calendars for computing availability (currently supports Google Calendar API)
  ☆25Updated 4 years ago
• jrderuiter / geneviz
  Library for visualising genomic features in Python.
  ☆15Updated 8 years ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 3 months ago
• dohalloran / PrimerMapper
  GUI for batch primer design with graphical output for PCR and SNP detection
  ☆17Updated 7 years ago
• IQTLabs / freqgen
  🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies
  ☆17Updated 2 years ago
• StanfordBioinformatics / loom
  A tool for running bioinformatics workflows locally or in the cloud.
  ☆30Updated 5 years ago
• wurmlab / genevalidatorapp
  A web wrapper for GeneValidator
  ☆11Updated 4 years ago
• carpentries-incubator / snakemake-novice-bioinformatics
  Introduction to Snakemake for Bioinformatics
  ☆21Updated this week
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 8 years ago
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆16Updated last month
• brentp / fishers_exact_test
  Fishers Exact Test for Python (Cython)
  ☆66Updated 8 months ago
• johandahlberg / piper
  A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…
  ☆21Updated 9 years ago
• nextflow-io / nf-hello
  Nextflow plugin implementation skeleton
  ☆11Updated 2 months ago
• cjlee112 / pygr
  Python graph database framework for bioinformatics
  ☆95Updated 3 years ago
• jbloomlab / alignparse
  Align sequences and then parse features.
  ☆17Updated 3 weeks ago
• bgruening / coding_for_big_data
  X things you should take into consideration if you code for big data analysis
  ☆23Updated 7 years ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 5 years ago
• dmnfarrell / pybioviz
  bioinformatics visualization tools with pyviz/bokeh
  ☆20Updated 2 years ago