RGLab / CytoMLLinks
A GatingML Interface for Cross Platform Cytometry Data Sharing
☆31Updated 5 months ago
Alternatives and similar repositories for CytoML
Users that are interested in CytoML are comparing it to the libraries listed below
Sorting:
- flowWorkspace☆45Updated 5 months ago
- R interface to morpheus.js heatmap widget☆38Updated 4 years ago
- R package for differential discovery analyses in high-dimensional cytometry data☆21Updated 6 months ago
- ☆74Updated last year
- Core flow cytometry infrastructure☆50Updated last year
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated last month
- R package for benchmarking single cell analysis methods☆32Updated last year
- Clone of the Bioconductor repository for the basilisk package.☆28Updated 3 months ago
- Template for building a bioconductor workshop package using github actions☆21Updated 2 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆39Updated last year
- ☆62Updated 5 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆78Updated 3 months ago
- Exploring dimension-reduced embeddings☆110Updated 3 years ago
- Visualize Cytometry data with ggplot2☆59Updated last month
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- Gene-level general linear mixed model☆22Updated 7 months ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated last month
- The blog of tidyomics☆14Updated last month
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆21Updated this week
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 8 months ago
- c++ library for representing and interacting the gated cytometry data structure☆13Updated 7 months ago
- Explore design matrices interactively with R/Shiny☆37Updated 4 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- Single Cell multimodal data scripts for downloading datasets☆17Updated 2 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 weeks ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated 2 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆66Updated last week
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆30Updated 3 months ago