nicolaroberts / hdpLinks
R pkg for Hierarchical Dirichlet Process
☆77Updated last year
Alternatives and similar repositories for hdp
Users that are interested in hdp are comparing it to the libraries listed below
Sorting:
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated last year
- An R package for multivariate adaptive shrinkage.☆92Updated 8 months ago
- ☆95Updated last year
- An R package to create forestplots of measures of effects with their confidence intervals.☆61Updated 4 years ago
- An introduction to matrix factorization and PCA and SVD.☆41Updated last year
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 7 months ago
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Updated 2 months ago
- Glimma R package☆50Updated 10 months ago
- Explore design matrices interactively with R/Shiny☆37Updated 3 months ago
- countsimQC - Compare characteristic features of count data sets☆27Updated 2 weeks ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Demonstration of the use of an R package to organize a data analysis project☆21Updated 5 years ago
- Bioconductor package for management of multi-assay data☆72Updated 2 months ago
- R package for benchmarking single cell analysis methods☆31Updated last year
- R package for computation of (adjusted) rand-index and other such scores☆26Updated last year
- ☆20Updated 3 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆43Updated 7 months ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- See https://github.com/LTLA/SingleRBook for the latest version of this content.☆11Updated 3 years ago
- Mixed models @lme4 + custom covariances + parameter constraints☆53Updated 4 years ago
- Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.☆80Updated 2 weeks ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 2 months ago
- Clone of the Bioconductor repository for the basilisk package.☆28Updated last month
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 2 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆31Updated 3 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆31Updated 4 years ago
- ☆74Updated last year
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 2 years ago