nanoporetech / pomoxisLinks
Analysis components from Oxford Nanopore Research
☆96Updated last year
Alternatives and similar repositories for pomoxis
Users that are interested in pomoxis are comparing it to the libraries listed below
Sorting:
- Structural Variant Identification Method using Genome Assemblies☆133Updated 3 years ago
- RaGOO is no longer supported. Please use RagTag instead: https://github.com/malonge/RagTag☆174Updated 4 years ago
- SquiggleKit: A toolkit for manipulating nanopore signal data☆128Updated last year
- A tool for Racon polishing of miniasm assemblies☆78Updated 4 months ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆107Updated last week
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- Pipeline to convert a haploid assembly into diploid☆110Updated last year
- ONT assembly and Illumina polishing pipeline☆88Updated 5 years ago
- Long-read mock community experiments☆104Updated 4 years ago
- Research release basecalling models and configurations☆117Updated 8 months ago
- Nanopore data assembler☆164Updated 3 years ago
- A fast whole-genome aligner based on de Bruijn graphs☆157Updated 6 months ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆55Updated last year
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆154Updated this week
- ☆81Updated 5 years ago
- De novo assembly from Oxford Nanopore reads.☆88Updated 2 months ago
- Create statistic summary of an Oxford Nanopore read dataset☆131Updated 3 years ago
- qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.☆80Updated 5 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆121Updated 3 months ago
- Chromosome-level scaffolding using multiple references☆164Updated last year
- Read Until client library for Nanopore Sequencing☆107Updated last year
- Pairwise SNP distance matrix from a FASTA sequence alignment☆151Updated 3 weeks ago
- An accurate and ultra-fast hybrid genome assembler☆87Updated last year
- A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulatio…☆121Updated 7 months ago
- Interactive quality assessment of genome assemblies☆117Updated last month
- Yet another k-mer analyzer☆157Updated 3 weeks ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆112Updated 4 months ago
- Flip-flop basecaller for Oxford Nanopore reads☆99Updated 4 years ago
- Structural Variant Identification Method using Long Reads☆181Updated 4 years ago
- Visualise and analyse nanopore (ONT) raw signals☆127Updated last month