AR1MA1 - VBEM reverse engineering GRNs method
☆10Sep 26, 2019Updated 6 years ago
Alternatives and similar repositories for GRNVBEM
Users that are interested in GRNVBEM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SINCERITIES is a tool for inferring gene regulatory networks from time-stamped cross-sectional single cell transcriptional expression pro…☆14Oct 16, 2017Updated 8 years ago
- SCODE : an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation☆47Dec 12, 2019Updated 6 years ago
- Machine learning-based approach for the inference of gene regulatory networks from expression data.☆100Sep 24, 2021Updated 4 years ago
- This is the code release for paper Continuous State HMMs for Modeling Time Series Single Cell RNA-Seq Data☆23Jan 22, 2018Updated 8 years ago
- Identifying cell subpopulational differences among single-cell biospecimens☆16Sep 27, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Single cell network synthesis toolkit☆23Feb 15, 2021Updated 5 years ago
- Feature Selection and Extraction☆19Jul 10, 2015Updated 10 years ago
- CV/Resume_latex_template☆12Jan 5, 2020Updated 6 years ago
- Cell-specific Network Constructed by Single-cell RNA Sequencing Data☆21Dec 15, 2018Updated 7 years ago
- ☆10Jan 24, 2023Updated 3 years ago
- A tool for evaluating RNA seq mapping☆22Jul 12, 2019Updated 6 years ago
- ☆12May 27, 2021Updated 4 years ago
- TENET is a tool for reconstructing gene regulatory networks from pseudo-time ordered single-cell transcriptomic data.☆41Mar 18, 2022Updated 4 years ago
- Code for ICML 2019 paper on "Fast and Simple Natural-Gradient Variational Inference with Mixture of Exponential-family Approximations"☆19Jan 2, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Factorize metagenotypes to infer strains and their abundances☆12Sep 29, 2024Updated last year
- Scalable inference of gene regulatory networks using Apache Spark and XGBoost☆20Feb 8, 2018Updated 8 years ago
- Learning Deep Representations for Graph Clustering Implementation☆20Apr 25, 2019Updated 6 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Sep 24, 2018Updated 7 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆34Jan 9, 2024Updated 2 years ago
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 4 years ago
- A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data☆31Jan 1, 2025Updated last year
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- C++ shortest path with curvature and torsion taken into account☆12Mar 13, 2015Updated 11 years ago
- Branching Gaussian process☆30May 14, 2023Updated 2 years ago
- Inferring gene co-expression networks from single cell gene expression data☆28Aug 5, 2022Updated 3 years ago
- An alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome☆10Jan 25, 2019Updated 7 years ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆16Mar 17, 2023Updated 3 years ago
- Tensorflow Implementation of "DUP-Net: Denoiser and Upsampler Network for 3D Adversarial Point Clouds Defense", ICCV 2019☆15Aug 10, 2021Updated 4 years ago
- ☆17Aug 17, 2021Updated 4 years ago
- Sparse unsupervised capsules☆23Jan 22, 2019Updated 7 years ago
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆20Nov 15, 2022Updated 3 years ago
- Read error correction tool for PacBio data☆12Dec 11, 2024Updated last year
- ☆12Jan 31, 2023Updated 3 years ago
- Catalogue of pairwise alignment algorithms and benchmarks☆25Jan 6, 2026Updated 2 months ago
- Issues and pull requests for BiocStyle should go here.☆14Oct 30, 2025Updated 4 months ago
- Code to minimize the Variational Contrastive Divergence (VCD)☆29May 30, 2019Updated 6 years ago
- Rank-normalization, folding, and localization: An improved R-hat for assessing convergence of MCMC☆32Nov 10, 2021Updated 4 years ago