Alternatives and similar repositories for xMWAS

Users that are interested in xMWAS are comparing it to the libraries listed below

• girke-lab / drugbankR
  R package for querying the DrugBank database in batch locally
  ☆37Updated 4 years ago
• KatrionaGoldmann / volcano3D
  An R package to plot interactive three-way differential expression analysis
  ☆38Updated 2 years ago
• ropensci / UCSCXenaTools
  An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…
  ☆111Updated last month
• CRI-iAtlas / shiny-iatlas
  An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app
  ☆49Updated 4 years ago
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆79Updated last month
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆30Updated last year
• casecpb / KSEA
  Kinase-Substrate Enrichment Analysis (KSEA) App
  ☆10Updated 8 years ago
• anhtr / HPAanalyze
  A Bioconductor package to retrieve and analyze data from the Human Protein Atlas
  ☆38Updated 5 months ago
• gdancik / shinyGEO
  https://gdancik.github.io/shinyGEO/
  ☆25Updated 4 years ago
• NightingaleHealth / ggforestplot
  An R package to create forestplots of measures of effects with their confidence intervals.
  ☆63Updated 4 years ago
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 3 years ago
• enriquea / feseR
  feseR: Combining feature selection methods for analyzing omics data
  ☆16Updated 9 months ago
• cran / limma
  Linear Models for Microarray Data
  ☆12Updated 11 years ago
• tidyomics / tidySummarizedExperiment
  Brings SummarizedExperiment to the tidyverse
  ☆28Updated last week
• pcastellanoescuder / POMAShiny
  Web-based User-friendly Workflow for Metabolomics and Proteomics Data Analysis
  ☆18Updated 2 years ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆31Updated 6 months ago
• denalitherapeutics / archs4
  An R interface to query and extract data from the ARCHS4 data
  ☆10Updated 7 years ago
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆22Updated last month
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 6 years ago
• liuhong-jia / scAnno
  ☆25Updated 5 months ago
• kmezhoud / bioCancer
  A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis
  ☆21Updated last year
• Bioconductor / SummarizedExperiment
  A container (S4 class) for matrix-like assays
  ☆36Updated 3 weeks ago
• folkehelseinstituttet / mobagen
  Documentation for MoBa Genetics data release
  ☆11Updated 3 years ago
• cmap / morpheus.R
  R interface to morpheus.js heatmap widget
  ☆39Updated 5 years ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 5 years ago
• egeulgen / PANACEA
  Personalized Network-based Anti-Cancer Therapy Appointment
  ☆10Updated 2 years ago
• Bioconductor / BiocParallel
  Bioconductor facilities for parallel evaluation
  ☆68Updated 3 weeks ago
• arnesmits / DEP
  DEP package
  ☆28Updated 3 years ago
• jokergoo / cola
  A General Framework for Consensus Partitioning
  ☆63Updated 9 months ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆72Updated this week