Alternatives and similar repositories for CLoNe

Users that are interested in CLoNe are comparing it to the libraries listed below

• wells-wood-research / BAlaS
  Source code for the BUDE Alanine Scan web application.
  ☆12Updated 4 months ago
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆24Updated last year
• GodzikLab / FATCAT-dist
  ☆17Updated 2 years ago
• mungpeter / RAMAplot
  Generate Ramachandran plots for single PDB structure and as heatmap for MD trajectory
  ☆10Updated 3 years ago
• tommyhuangthu / SSIPe
  EvoEF + evolutionary profile for ddG_bind prediction
  ☆14Updated 2 years ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆32Updated last year
• KULL-Centre / _2022_functional-sites-cagiada
  ☆23Updated 2 years ago
• Faezov / PDBrenum
  ☆30Updated 4 months ago
• ohuelab / MEGADOCK-on-Colab
  MEGADOCK on Google Colaboratory
  ☆18Updated 2 years ago
• CBIIT / KDS
  KDS software for Kinase Drug Selectivity
  ☆11Updated 2 years ago
• BioComputingUP / MobiDB-lite
  Long disorder consensus predictor
  ☆17Updated last month
• LPDI-EPFL / rstoolbox
  Python Toolbox For Rosetta Silent Files Processing
  ☆16Updated 6 years ago
• bouralab / Prop3D
  A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…
  ☆38Updated last year
• SwitchLab-VIB / EvolveX
  EvolveX, a de novo antibody computational design pipeline.
  ☆12Updated 3 weeks ago
• Wang-Lin-boop / PPI-Miner
  A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design
  ☆19Updated 8 months ago
• UCLOrengoGroup / cath-alphaflow
  ☆23Updated 4 months ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• haddocking / prodigy-lig
  Prediction of Protein-Small molecule binding affinities
  ☆18Updated last week
• PhilippJunk / homelette
  A unified and modular interface to homology modelling software
  ☆11Updated 2 years ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆32Updated last year
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 3 months ago
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆37Updated 6 months ago
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆17Updated last year
• charles-abreu / GRaSP
  https://grasp.ufv.br/
  ☆15Updated 2 years ago
• duolinwang / MusiteDeep_web
  This repository contains the stand-alone tool for MusiteDeep server
  ☆34Updated 4 years ago
• DeepRank / PSSMGen
  Generates consistent PSSM and/or PDB files for protein-protein complexes
  ☆20Updated 3 years ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆45Updated 5 months ago
• scdantu / pycom
  ☆10Updated 5 months ago
• alirezaomidi / AFM-IDR
  Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"
  ☆16Updated 10 months ago
• samgoldman97 / enz-pred
  ☆17Updated 3 years ago