TianLab-Bioinfo / scMAGIC
A robust and accurate cell type classifier for single cell RNA-seq data
☆16Updated last year
Alternatives and similar repositories for scMAGIC:
Users that are interested in scMAGIC are comparing it to the libraries listed below
- ☆29Updated 3 weeks ago
- ☆31Updated 5 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆28Updated 2 years ago
- A pipeline for scRNA-seq data analysis☆12Updated last year
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆31Updated last year
- Network construction Algorithm☆20Updated 5 months ago
- ☆31Updated 9 months ago
- ☆45Updated 6 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆23Updated 7 months ago
- ☆16Updated last year
- R package of CSOmap(developing☆14Updated 2 years ago
- ☆22Updated 4 months ago
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆15Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 2 months ago
- single-cell clustering based on alternative splicing landscapes☆18Updated 11 months ago
- ☆27Updated 3 years ago
- Inferring CNV data from single cell ATAC seq☆23Updated last year
- ☆15Updated 8 months ago
- Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data☆19Updated 2 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆42Updated last year
- Repository for "Effective methods for bulk RNA-seq deconvolution using scRNA-seq and snRNA-seq derived transcriptomes"☆13Updated last year
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆25Updated 4 months ago
- ☆57Updated 7 months ago
- scWGCNA☆56Updated 2 years ago
- ☆19Updated last year
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆21Updated last year
- ☆12Updated 7 months ago
- An R package to plot maps of clone distributions in somatic evolution☆17Updated last year