TianLab-Bioinfo / scMAGICLinks
A robust and accurate cell type classifier for single cell RNA-seq data
☆17Updated 2 years ago
Alternatives and similar repositories for scMAGIC
Users that are interested in scMAGIC are comparing it to the libraries listed below
Sorting:
- ☆32Updated 11 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 3 years ago
- ☆39Updated 4 months ago
- A pipeline for scRNA-seq data analysis☆15Updated 9 months ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- ☆18Updated last year
- scWGCNA☆61Updated 3 years ago
- ☆53Updated last year
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- ☆47Updated 5 years ago
- Code repository for single cell RNA-seq☆39Updated 5 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Functional Inference of Gene Regulation☆49Updated last year
- ☆15Updated last year
- R package of CSOmap(developing☆13Updated 3 years ago
- R package to detect breakpoints and assign somies to scATAC-seq data☆42Updated last month
- ☆25Updated 2 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆45Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 9 months ago
- ☆50Updated 5 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆36Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆25Updated 8 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- R package IReNA☆29Updated last year
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆62Updated 2 months ago
- Inferring CNV data from single cell ATAC seq☆25Updated 6 months ago
- A R package for advanced single cell data viz☆69Updated 4 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 8 months ago