https://taxonomicallyinformedannotation.github.io/tima
☆16Aug 7, 2026Updated this week
Alternatives and similar repositories for tima
Users that are interested in tima are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Ms2 basEd saMple vectOrization (memo) package☆17Jun 13, 2023Updated 3 years ago
- A programmable and modular LC/MS simulator in Python☆25Jul 3, 2026Updated last month
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆57Apr 23, 2026Updated 3 months ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆36Jun 13, 2026Updated last month
- Code for LOTUS web☆14Nov 18, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆24Sep 18, 2025Updated 10 months ago
- CANOPUS visualization for Jupyter notebook☆20Mar 9, 2022Updated 4 years ago
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆25Aug 30, 2025Updated 11 months ago
- A fantastic crate for formatting numbers using the appropriate unicode characters☆15Jan 13, 2026Updated 6 months ago
- A prototype for organizing bibliography notes using Wikidata☆14Nov 8, 2023Updated 2 years ago
- 👁️🗨️ Scientists often do the same bad stuff. Automate giving deterministic feedback during peer review with determinstic (LLM-free)☆32May 9, 2025Updated last year
- ☆11Feb 22, 2022Updated 4 years ago
- R Interface to the Metabolights REST API☆11Jun 10, 2026Updated 2 months ago
- Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.☆263Updated this week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆17Updated this week
- SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…☆160Jul 29, 2026Updated last week
- ☆30Jan 15, 2026Updated 6 months ago
- Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…☆53Apr 28, 2026Updated 3 months ago
- ☆19Jun 14, 2023Updated 3 years ago
- QC systems for metabolomics studies☆11Sep 17, 2025Updated 10 months ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆21Oct 15, 2024Updated last year
- ☆11Apr 25, 2026Updated 3 months ago
- 💫 A standard web component to deploy a user-friendly SPARQL query editor for one or more endpoints. Built on the popular YASGUI editor, …☆24Dec 9, 2025Updated 8 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆23Jul 15, 2026Updated 3 weeks ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆63Jul 13, 2024Updated 2 years ago
- NP-KG: Knowledge Graph Framework for Natural Product-Drug Interactions☆20Jun 25, 2024Updated 2 years ago
- Open Traits Network Registry and Website☆13Jun 9, 2026Updated 2 months ago
- GNfinder finds scientific names in UTF8 texts, PDF files, MS Word/Excel documents, URLs etc.☆54May 19, 2026Updated 2 months ago
- Website code for COCONUT☆35Oct 4, 2023Updated 2 years ago
- mzmine source code repository☆292Updated this week
- 🤖 MetaboT 🍵 is an AI system that accelerates mass spectrometry-(MS) based metabolomics knowledge graph mining☆32May 7, 2026Updated 3 months ago
- Bioactive Molecular Networks Project☆17Nov 17, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- a python package for molecular formula analysis in MS-based small molecule studies☆37Jan 28, 2026Updated 6 months ago
- Spectral entropy for mass spectrometry data.☆38Jul 7, 2026Updated last month
- Word2Vec based similarity measure of mass spectrometry data.☆87Nov 10, 2025Updated 9 months ago
- Write reproducible code for getting and processing ChEMBL☆93Sep 14, 2025Updated 10 months ago
- Metabolic In silico Network Expansion (MINE) Database Construction and DB Logic☆21Apr 21, 2026Updated 3 months ago
- Public Workflows at GNPS☆65Jan 30, 2024Updated 2 years ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆31Apr 11, 2023Updated 3 years ago