merenlab / tRNA-seq-toolsLinks
☆10Updated 6 years ago
Alternatives and similar repositories for tRNA-seq-tools
Users that are interested in tRNA-seq-tools are comparing it to the libraries listed below
Sorting:
- CADD-SV – a framework to score the effect of structural variants☆15Updated 6 months ago
- Personal diploid genome creation and coordinate conversion☆30Updated 5 months ago
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Updated 9 years ago
- fastx-utils using klib☆20Updated 5 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- Tools to process LIANTI sequence data☆23Updated 6 years ago
- Long read to rMATS☆32Updated 2 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 6 months ago
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- Framework to benchmark algorithms when detecting germline copy number variations (CNVs) from NGS data☆14Updated 8 months ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- alternative splicing analysis pipeline☆20Updated 4 years ago
- Structural Variation breakpoint discovery via adaptive learning☆16Updated 2 years ago
- RNAseq analysis with Hisat2, stringtie, and ballgown☆17Updated 6 years ago
- A program for summarising CpG methylation patterns☆20Updated 9 years ago
- Streamlined duo/trio analysis and pedigree haplotyping: from VCF to interactive HTML☆15Updated 10 months ago
- ☆23Updated this week
- CNV Rapid Aberration Detection And Reporting☆12Updated 4 years ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆21Updated 3 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- CAVA (Clinical Annotation of VAriants)☆14Updated 6 years ago
- Automated human exome/genome variants detection from FASTQ files☆23Updated 3 years ago
- Enabling differential allele-specific analysis☆11Updated 8 months ago
- Computes various SV statistics☆14Updated last year
- Aggregation and analyses of rare CNVs across diseases☆14Updated 2 years ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Updated 5 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago