inodb / 2014-5-metagenomics-workshopView external linksLinks
Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm
☆18May 23, 2014Updated 11 years ago
Alternatives and similar repositories for 2014-5-metagenomics-workshop
Users that are interested in 2014-5-metagenomics-workshop are comparing it to the libraries listed below
Sorting:
- Repository of our application for human-augmented binning☆27Apr 26, 2021Updated 4 years ago
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆14Feb 10, 2022Updated 4 years ago
- ☆11Aug 6, 2019Updated 6 years ago
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- Please use mmgenome2 instead. Tools for extracting individual genomes from metagenomes☆27Aug 18, 2017Updated 8 years ago
- An extension of Velvet assembler to de novo metagenome assembly from short sequence reads☆15May 29, 2012Updated 13 years ago
- Detection of NCLDV signatures in 'omic data☆35Dec 28, 2025Updated last month
- RDP extensible sequence classifier for fungal lsu, bacterial and archaeal 16s☆59Dec 21, 2022Updated 3 years ago
- ☆16Jun 21, 2018Updated 7 years ago
- Hominid: host-microbiome interaction identification☆16Jun 17, 2024Updated last year
- Scripts and resources for analyzing sequence data for select eco-functional genes☆20May 25, 2017Updated 8 years ago
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 3 years ago
- Metagenomics Analysis Tools☆24May 7, 2018Updated 7 years ago
- Scripts and tutorials on how to assemble individual microbial genomes from metagenomes☆80Jun 14, 2016Updated 9 years ago
- metag-rev-sup☆22Jun 21, 2017Updated 8 years ago
- Clustering cONtigs with COverage and ComposiTion☆137Mar 6, 2020Updated 5 years ago
- Auto-parameterizing QC Pipeline for Illumina sequencing runs☆17Jul 9, 2024Updated last year
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Feb 12, 2016Updated 10 years ago
- An automated assembly pipeline for microbial genomes☆19Jan 15, 2026Updated last month
- ☆20Jan 12, 2017Updated 9 years ago
- Latest MOCAT2 version☆18Mar 8, 2021Updated 4 years ago
- MicrobeCensus estimates the average genome size of microbial communities from metagenomic data☆48Apr 14, 2020Updated 5 years ago
- Collection of commonly used RDP Tools for easy building☆51Jun 8, 2023Updated 2 years ago
- fastx-utils using klib☆20Sep 1, 2020Updated 5 years ago
- ☆132Jul 9, 2023Updated 2 years ago
- Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies☆26Feb 28, 2023Updated 2 years ago
- ☆24May 17, 2020Updated 5 years ago
- R and python scripts for correlation-based network analysis☆62May 17, 2020Updated 5 years ago
- Accurate read-based metagenome characterization using a hierarchical suite of unique signatures. Please visit our homepage:☆23Jan 29, 2019Updated 7 years ago
- MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs☆23Mar 19, 2023Updated 2 years ago
- R package providing various functions relevant for gene expression analysis with emphasis on breast cancer.☆29May 20, 2025Updated 8 months ago
- Snakemake pipeline for plate scATAC-seq processing☆26Dec 7, 2023Updated 2 years ago
- A simple tool for extracting reads from Oxford Nanopore fast5 files☆26Sep 4, 2017Updated 8 years ago
- Python programming workshop for bioinformatics☆10Jul 13, 2021Updated 4 years ago
- Phylogenetic and taxonomic analysis for genomes and metagenomes☆82Feb 17, 2016Updated 10 years ago
- Multi-threaded Distributed Memory Overlap-Layout-Consensus (OLC) Metagenome Assembler☆24Apr 10, 2019Updated 6 years ago
- A comprehensive pipeline for short read metagenomic data☆24Aug 25, 2020Updated 5 years ago
- A Linear Discriminant Analysis Effect Size (LEfSe) wrapper.☆26Feb 2, 2017Updated 9 years ago
- 病原微生物高通量测序数据分析笔记☆30Apr 17, 2019Updated 6 years ago