inodb / 2014-5-metagenomics-workshopLinks
Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm
β18Updated 11 years ago
Alternatives and similar repositories for 2014-5-metagenomics-workshop
Users that are interested in 2014-5-metagenomics-workshop are comparing it to the libraries listed below
Sorting:
- Schloss Lab Tools for Reproducible Microbiome Research π©β31Updated 2 years ago
- A set of R scripts for the analysis of microbial profilesβ41Updated last year
- Handy tools for Microbiome analysis in Rβ18Updated 6 years ago
- β23Updated 7 years ago
- The is mostly a wrapper tool using phyloseq and microbiome R packages.β33Updated 2 years ago
- An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studiβ¦β34Updated 5 years ago
- PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairsβ52Updated 3 weeks ago
- AMPtk: Amplicon ToolKit for NGS data (formally UFITS)β39Updated 2 years ago
- Interactive tools for metagenome visualization and binning in Rβ27Updated 7 years ago
- ggtree version of plotTree.Rβ18Updated 7 years ago
- Tools for visualising microbial community amplicon dataβ70Updated 2 weeks ago
- Miscellaneous Bioinformatics scripts etc mostly in Pythonβ45Updated 2 weeks ago
- Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)β18Updated 3 years ago
- A set of R functions that help faciliate a lot of tedious processingβ18Updated 7 years ago
- tutorials for 2015 EDAMAMEβ24Updated 8 years ago
- SHallow shOtGUN profilerβ53Updated 3 years ago
- β17Updated 7 years ago
- Advanced metagenomic Sequence Analysis in Rβ15Updated 7 years ago
- β43Updated 8 years ago
- RDP extensible sequence classifier for fungal lsu, bacterial and archaeal 16sβ59Updated 2 years ago
- Genome wide orthology inference and dNdS estimationβ96Updated 2 months ago
- Metagenomic AnalySis with QUantitative pipElineβ12Updated 6 years ago
- power estimation for microbiome studies analyzed with pairwise distances and PERMANOVAβ39Updated 9 years ago
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.β27Updated 3 years ago
- Computational workflows for metagenomics tasks, by the Bhatt labβ47Updated 2 years ago
- β67Updated 9 years ago
- A visualization tool for exploratory data analysis of metagenomic dataβ37Updated 3 years ago
- Metagenomic profiling and phylogenetic distances via common kmersβ42Updated 4 years ago
- Compare different differential abundance and expression methodsβ52Updated 3 years ago
- Using kallisto for metagenomic analysisβ49Updated 8 years ago