inodb / 2014-5-metagenomics-workshopLinks
Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm
☆18Updated 11 years ago
Alternatives and similar repositories for 2014-5-metagenomics-workshop
Users that are interested in 2014-5-metagenomics-workshop are comparing it to the libraries listed below
Sorting:
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆31Updated 2 years ago
- A set of R scripts for the analysis of microbial profiles☆41Updated last year
- ☆23Updated 7 years ago
- Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)☆18Updated 3 years ago
- Handy tools for Microbiome analysis in R☆18Updated 6 years ago
- Interactive tools for metagenome visualization and binning in R☆27Updated 7 years ago
- Genome wide orthology inference and dNdS estimation☆96Updated 3 months ago
- PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs☆52Updated last month
- Advanced metagenomic Sequence Analysis in R☆15Updated 7 years ago
- Statistical analysis for sparse high-throughput sequencing☆71Updated 11 months ago
- RDP extensible sequence classifier for fungal lsu, bacterial and archaeal 16s☆59Updated 2 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47Updated 3 years ago
- SHallow shOtGUN profiler☆53Updated 3 years ago
- Please use mmgenome2 instead. Tools for extracting individual genomes from metagenomes☆27Updated 8 years ago
- The is mostly a wrapper tool using phyloseq and microbiome R packages.☆33Updated 3 years ago
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆27Updated 3 years ago
- Using kallisto for metagenomic analysis☆49Updated 8 years ago
- An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studi…☆34Updated 5 years ago
- AMPtk: Amplicon ToolKit for NGS data (formally UFITS)☆39Updated 2 years ago
- A set of R functions that help faciliate a lot of tedious processing☆18Updated 7 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated last week
- Tools for visualising microbial community amplicon data☆70Updated last month
- ☆17Updated 7 years ago
- Tools for extracting individual genomes from metagenomes☆16Updated 2 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 7 years ago
- ☆41Updated 8 years ago
- Talk to the NCBI EUtils☆22Updated 5 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- A pipeline for performing genome-wide association tests for bacterial genomes.☆27Updated 7 years ago