Biological Graphic tool in Python
☆34May 14, 2020Updated 6 years ago
Alternatives and similar repositories for BioGraPy
Users that are interested in BioGraPy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A small library for ranges/intervals, for use with genomic data.☆17Nov 27, 2012Updated 13 years ago
- Simple interval class for fast fasta access☆10Jun 18, 2012Updated 14 years ago
- Biopsy - the Bioinformatic Optimisation System☆16Nov 1, 2015Updated 11 years ago
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- DEPRECATED Lightweight bioinformatics pipeline tools using iPython☆14Dec 11, 2015Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- PubMed Watcher - Tailored biomedical literature feed☆11Sep 18, 2013Updated 13 years ago
- A Swiss army knife for genome projects☆15Aug 13, 2013Updated 13 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Jul 7, 2017Updated 9 years ago
- Design compact restriction sites arrays (python utility)☆10Apr 9, 2025Updated last year
- Efficient handling of FASTQ files from Python☆51Nov 28, 2025Updated 11 months ago
- Copy number estimation of highly duplicated sequences☆12Aug 15, 2017Updated 9 years ago
- A universal genomic coordinate translator for comparative genomics☆12Jul 6, 2017Updated 9 years ago
- Interactive tree visualizations in Python (powered by Vega).☆11Sep 26, 2019Updated 7 years ago
- Systematic ProtEin AnnotatoR☆19Sep 20, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A suite of javascript apps for visualizing sequencing data☆12Nov 18, 2013Updated 12 years ago
- kaamer - protein identification based on amino acid kmers☆11Mar 7, 2023Updated 3 years ago
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆17Jan 23, 2023Updated 3 years ago
- Simple tool to verticalize text delimited files.☆36May 6, 2024Updated 2 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23Oct 14, 2026Updated 3 weeks ago
- Playing around with the human genome and Clojure☆11Mar 15, 2022Updated 4 years ago
- ☆17Sep 24, 2013Updated 13 years ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Mar 9, 2021Updated 5 years ago
- NCBI Pathogen Detection Portal toolkit☆11Sep 6, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Abbreviate strings to short, unique identifiers☆24May 10, 2022Updated 4 years ago
- rapidly rid reads of horrid humans☆15Dec 2, 2021Updated 4 years ago
- Efficient pythonic random access to fasta subsequences☆489Updated this week
- library for interfacing with NCBI's Entrez eUtils web service☆11Aug 23, 2012Updated 14 years ago
- Forensic analysis tool useful in backwards computing information from next-generation sequencing data.☆11Sep 7, 2026Updated last month
- Enriched Domain Detector for ChIP-seq data☆16Aug 17, 2022Updated 4 years ago
- SaffronTree: Reference free rapid phylogenetic tree construction from raw read data☆25Jun 11, 2020Updated 6 years ago
- (Obsolete) NCBI Prokaryotic Genome Annotation Pipeline. New site:☆16Sep 7, 2018Updated 8 years ago
- localised duplicate detection on patterned flow cells☆10Feb 27, 2019Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A flexible python program for generating figures from regions of the genome.☆13Apr 6, 2019Updated 7 years ago
- Bacterial genomes finishing tool for structural insights on draft genomes☆23Sep 22, 2023Updated 3 years ago
- example ruffus pipeline☆18Sep 30, 2011Updated 15 years ago
- A python script used to annotate genomic intervals.☆18May 29, 2020Updated 6 years ago
- Software for error-tolerant coding of information into DNA sequences using finite-state transducers.☆12Jan 8, 2017Updated 9 years ago
- Creates a rarefaction curve to measure complexity in RNA Seq data using start position☆13Apr 2, 2017Updated 9 years ago
- iBWA is a fork of Heng Li's BWA aligner with support for iteratively adding alternate haplotypes, reference patches, and variant hypothes…☆13Aug 6, 2014Updated 12 years ago