Trinotate annotation report summaries in R
☆13Feb 24, 2016Updated 10 years ago
Alternatives and similar repositories for trinotateR
Users that are interested in trinotateR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of programs for the taxonomic analysis of genetic sequences☆15Jun 12, 2023Updated 3 years ago
- ☆12May 30, 2019Updated 7 years ago
- Particle tracking and demography☆10Sep 24, 2021Updated 5 years ago
- de novo targeted gene assembly☆22Apr 16, 2021Updated 5 years ago
- web documentation for Trinotate☆48Jan 23, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated 2 years ago
- Building SuperTranscripts: A linear representation of transcriptome data☆68Mar 22, 2021Updated 5 years ago
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆22Jul 22, 2023Updated 3 years ago
- Probabilistic Inference of Molecular Evolution☆10Sep 6, 2021Updated 5 years ago
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆24Feb 12, 2020Updated 6 years ago
- An Efficient Swiss Army Knife for Population Genomic Analyses in R☆40May 21, 2024Updated 2 years ago
- exploratory and interactive microbiome analyses based on heatmaps☆27Jan 27, 2025Updated last year
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆14Mar 16, 2026Updated 7 months ago
- Pipeline for eukaryotic genome annotation based on external evidences☆15Feb 23, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …☆55May 11, 2020Updated 6 years ago
- ☆11May 3, 2017Updated 9 years ago
- Error correction for Illumina RNA-seq reads☆66Jan 4, 2026Updated 10 months ago
- Tools for data conversion and results visualization for fineRADstructure (http://cichlid.gurdon.cam.ac.uk/fineRADstructure.html)☆10Mar 24, 2020Updated 6 years ago
- Collections of data science guides☆23Oct 18, 2019Updated 7 years ago
- Promoter activity measurement and modeling; artificial promoter design and testing☆13Mar 24, 2023Updated 3 years ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- Create NNN primers tiling codons of a gene for codon mutagenesis☆14Jan 13, 2021Updated 5 years ago
- A shiny package for microbiome functional enrichment analysis☆42Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Knowledge Independent Network Construction☆12Dec 23, 2025Updated 10 months ago
- ☆32Mar 21, 2025Updated last year
- In-class notebooks and other useful materials.☆21Apr 14, 2022Updated 4 years ago
- A collection of scripts for processing fastq files in ways to improve de novo transcriptome assemblies, and for evaluating those assembli…☆51Mar 8, 2024Updated 2 years ago
- Retrieving HGNC gene symbol reports (human genes only) via a list of gene IDs.☆23Aug 24, 2026Updated 2 months ago
- QTL mapping in outcrossing species using CIM☆10Feb 5, 2026Updated 9 months ago
- New version of mpMap☆12Jul 19, 2020Updated 6 years ago
- Home repo for the Working Dogs pack of bioinformatics tools☆12Dec 21, 2025Updated 10 months ago
- A Microbiology-based Rogue-Like Game written in Lua via Love2D☆12Oct 3, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Hierarchical visualization for R/Shiny☆10Apr 19, 2019Updated 7 years ago
- ☆15Dec 16, 2021Updated 4 years ago
- Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)☆17Sep 19, 2024Updated 2 years ago
- Metabolite Atlas Main Repository☆16Oct 27, 2026Updated last week
- ☆17Nov 19, 2025Updated 11 months ago
- SRA python tools☆11Jun 9, 2021Updated 5 years ago
- The missing layers package for Bayesian regression☆42Oct 13, 2026Updated 3 weeks ago