Trinotate annotation report summaries in R
☆13Feb 24, 2016Updated 10 years ago
Alternatives and similar repositories for trinotateR
Users that are interested in trinotateR are comparing it to the libraries listed below
Sorting:
- A set of programs for the taxonomic analysis of genetic sequences☆14Jun 12, 2023Updated 2 years ago
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆21Jul 22, 2023Updated 2 years ago
- web documentation for Trinotate☆48Jan 23, 2023Updated 3 years ago
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆24Feb 12, 2020Updated 6 years ago
- exploratory and interactive microbiome analyses based on heatmaps☆27Jan 27, 2025Updated last year
- de novo targeted gene assembly☆22Apr 16, 2021Updated 4 years ago
- Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …☆56May 11, 2020Updated 5 years ago
- Error correction for Illumina RNA-seq reads☆68Jan 4, 2026Updated 2 months ago
- Building SuperTranscripts: A linear representation of transcriptome data☆68Mar 22, 2021Updated 4 years ago
- Probabilistic Inference of Molecular Evolution☆10Sep 6, 2021Updated 4 years ago
- An Efficient Swiss Army Knife for Population Genomic Analyses in R☆38May 21, 2024Updated last year
- Assembly by Reduced Complexity (ARC)☆42Mar 29, 2016Updated 9 years ago
- Repository of databases for omic data☆15Jan 9, 2024Updated 2 years ago
- A community effort to create a shared resource for HMM-based RdRp discovery☆14Feb 13, 2026Updated 3 weeks ago
- SRA python tools☆11Jun 9, 2021Updated 4 years ago
- New version of mpMap☆12Jul 19, 2020Updated 5 years ago
- ☆11Nov 17, 2020Updated 5 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- A shiny package for microbiome functional enrichment analysis☆38Dec 23, 2025Updated 2 months ago
- GpC methylation from fast5:s to reference anchored calls☆10Nov 18, 2020Updated 5 years ago
- ☆11May 3, 2017Updated 8 years ago
- Pipeline for identification of eukaryotic contigs in metagenomic assemblies☆13Mar 14, 2024Updated last year
- A tool for identification of plant long non-coding RNAs.☆10Aug 8, 2023Updated 2 years ago
- Find CpG islands in genome☆11Mar 27, 2020Updated 5 years ago
- ☆11May 27, 2024Updated last year
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- QTL mapping in outcrossing species using CIM☆10Feb 5, 2026Updated last month
- ☆11Nov 12, 2020Updated 5 years ago
- Particle tracking and demography☆10Sep 24, 2021Updated 4 years ago
- Scripts and documentations on the MCSC decontamination method☆10Jun 13, 2023Updated 2 years ago
- A lightweight AI agent which reads and summarizes research papers for you.☆12Jun 1, 2025Updated 9 months ago
- 细雪之舞·刷课神器(SnowbladeDance)：一款提升在线学习效率的浏览器插件，一键秒课、倍速播放（支持当前/全部页面）、全局/单页静音、全局/单页暂停、解除复制和右键限制、防止页面挂机超时以及自定义快速导航网址。☆13Sep 19, 2025Updated 5 months ago
- Day 2 of ACAD's 2018 Advanced Bioinformatics Workshop☆12Nov 27, 2018Updated 7 years ago
- ☆10Dec 22, 2025Updated 2 months ago
- A quick workflow to get researchers started with the bioinformatic pipeline used in the Environmental Metagenomics program.☆12Feb 17, 2025Updated last year
- Novo&Stitch is a genome assembly reconciliation tool based on optical map.☆10Oct 21, 2019Updated 6 years ago
- Create NNN primers tiling codons of a gene for codon mutagenesis☆14Jan 13, 2021Updated 5 years ago
- Text Analysis with Python☆12Updated this week
- A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes☆51Jan 15, 2025Updated last year