Python library for SBGN
☆12Oct 5, 2026Updated this week
Alternatives and similar repositories for libsbgnpy
Users that are interested in libsbgnpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Libraries for the Systems Biology Graphical Notation (SBGN); Java and C++☆21Oct 8, 2024Updated 2 years ago
- Ontology of algorithms for analyzing biological models, their parameters, and their outputs☆12Mar 31, 2026Updated 6 months ago
- SyBLaRS: Systems Biology Layout & Rendering Service☆12Nov 18, 2024Updated last year
- A web application to visualize and edit pathway models☆63Updated this week
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Python utilities for SBML☆42Updated this week
- Python solution for the application of machine learning to Pop PK model selection.☆32Sep 25, 2026Updated 2 weeks ago
- cy3sbml: SBML for Cytoscape 3☆16Updated this week
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆22Jul 22, 2023Updated 3 years ago
- A computational method for comparing cellular profiles with the flexibility to place a higher weight on functional features of interest.☆12Jan 31, 2023Updated 3 years ago
- A drop station for kOS scripts to share with others.☆13Jun 18, 2023Updated 3 years ago
- Example code for calling Panther API services☆13Dec 12, 2023Updated 2 years ago
- ☆10Jul 21, 2022Updated 4 years ago
- Bacting is an open-source platform for chemo- and bioinformatics based on Bioclipse that defines a number of common domain objects and wr…☆23Aug 29, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- BRENDA parser in python☆23May 16, 2022Updated 4 years ago
- Brendan's skeleton scRNAseq workflow using scran, Seurat, and scClustViz☆11Apr 22, 2020Updated 6 years ago
- iGem Marburg 2019☆21Dec 7, 2019Updated 6 years ago
- DNA overhang misannealing data for Python☆14May 15, 2025Updated last year
- Data-Driven Constraint-based analysis☆12Nov 4, 2022Updated 3 years ago
- Collection of talks given in the ML reading group@IIITD☆11Mar 31, 2021Updated 5 years ago
- KnetBuilder data integration platform for building knowledge graphs. Previously known as ondex.☆16Sep 30, 2026Updated last week
- Processing and Visualization of Proteome-wide MS-CETSA data☆13Feb 9, 2023Updated 3 years ago
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆13Aug 21, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Encoding Dynamic Flux Balance Analysis in SBML☆13Sep 16, 2020Updated 6 years ago
- Import SBML dynamic models into the Julia SciML ecosystem for jump (Gillespie), SDE, and ODE simulations☆25Updated this week
- Julia for Systems Biology Workshop @JuliaCon 2024☆13Jul 8, 2024Updated 2 years ago
- Human Protein Atlas - Single Cell Classification 2nd place solution Dual Head pipeline☆13May 25, 2021Updated 5 years ago
- Monorepo for Apollo 3 server-side and client-side (JBrowse 2 plugin) components.☆17Updated this week
- Transform Jupyter Notebook to a beautifully formated Ebook☆19May 18, 2020Updated 6 years ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆33Mar 27, 2026Updated 6 months ago
- A complete example of batched refactorization in cuSOLVER.☆12Dec 22, 2021Updated 4 years ago
- Schedule free optimiser implemented in JAX using Optimistix☆14May 29, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A basic implementation of the UPGMA (Unweighted Pair Group Method with Arithmetic Mean) clustering algorithm in Python.☆13Dec 11, 2015Updated 10 years ago
- ☆16Dec 8, 2022Updated 3 years ago
- Single species module discovery☆14Oct 18, 2022Updated 3 years ago
- A collection of M models downloaded from published studies☆18Feb 18, 2016Updated 10 years ago
- A simple tutorial on creating online books☆27Aug 11, 2021Updated 5 years ago
- A web based visualization tool for process description maps in SBGN☆35Updated this week
- A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…☆22Jul 9, 2026Updated 3 months ago