madilabcode / scNETLinks
☆53Updated last week
Alternatives and similar repositories for scNET
Users that are interested in scNET are comparing it to the libraries listed below
Sorting:
- ☆44Updated last year
- ☆54Updated 11 months ago
- Predict RNA velocity through deep learning☆70Updated last year
- ☆45Updated last year
- Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases.☆36Updated 3 months ago
- Gene group activity utility functions for Scanpy☆90Updated 9 months ago
- ☆59Updated 3 months ago
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆40Updated last month
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆25Updated 4 months ago
- ☆114Updated 4 months ago
- ☆30Updated 2 months ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆103Updated last week
- Single cell omics biology annotations☆51Updated 5 months ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated 2 weeks ago
- TACCO: Transfer of Annotations to Cells and their COmbinations☆59Updated last month
- ☆38Updated 3 months ago
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆23Updated 2 years ago
- ☆48Updated 6 months ago
- inferring regulatory cellular dynamics☆56Updated last week
- Spatial transcriptomics of heart tissue☆96Updated 2 years ago
- A tool for semi-automatic cell type harmonization and integration☆111Updated 6 months ago
- R implementation of GeneTrajectory☆65Updated last year
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆64Updated 2 months ago
- ☆31Updated 3 years ago
- ☆60Updated 2 years ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆26Updated last year
- ☆83Updated last week
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆67Updated last year
- ☆46Updated last year