y9c / m6A-SACseqLinks
π§ͺ Optimized protocol for m6A-SAC-seq
β11Updated 6 months ago
Alternatives and similar repositories for m6A-SACseq
Users that are interested in m6A-SACseq are comparing it to the libraries listed below
Sorting:
- β11Updated 3 years ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seqβ20Updated 5 months ago
- An R package to process and analyze transcriptomic dataβ18Updated 6 months ago
- β11Updated 3 years ago
- Code for reproducing the Sei manuscript resultsβ17Updated 3 years ago
- RNA-binding protein motif analysisβ10Updated 3 months ago
- splicing and feature maps for RBPsβ25Updated 3 years ago
- β16Updated last year
- Comprehensive and scalable differential splicing analysesβ17Updated 3 weeks ago
- Feature-rich Python implementation of the tximport package for gene count estimation.β41Updated 2 months ago
- Identifying genome-wide translated open reading frames using ribosome profilingβ24Updated 2 years ago
- Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)β20Updated 3 years ago
- The project for analyzing differential methylation of MeRIP-seq dataβ23Updated 2 years ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022β24Updated 3 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysisβ35Updated 4 years ago
- AIDE: annotation-assisted isoform discovery and quantification from RNA-seq dataβ14Updated 3 years ago
- High-definition modeling of chromatin + transcriptomics dataβ26Updated 8 months ago
- APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approachβ¦β12Updated last year
- Shape Changes In Selecting Sample Outliers in RNA-seqβ12Updated 3 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditionsβ41Updated 3 years ago
- General Use Scripts and Helper functionsβ16Updated 7 years ago
- direct comparison of circular and linear RNA expressionβ23Updated 4 years ago
- Motif Scan and Enrichment Analysis (MoSEA)β17Updated 5 years ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.β13Updated 3 weeks ago
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility dataβ45Updated 3 months ago
- β18Updated 3 years ago
- β23Updated 11 months ago
- β36Updated 3 years ago
- Causal inference, differential expression, and co-expression for scRNA-seqβ19Updated 3 weeks ago
- β18Updated last year