stPlus: reference-based enhancement of spatial transcriptomics
☆20Jan 6, 2024Updated 2 years ago
Alternatives and similar repositories for stPlus
Users that are interested in stPlus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆43Jul 1, 2024Updated 2 years ago
- A deep convolutional neural network for the accurate prediction of silencers☆16May 23, 2023Updated 3 years ago
- Single-cell epigenomic data annotation via supervised non-linear embedding☆24Apr 14, 2022Updated 4 years ago
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆18Oct 17, 2024Updated last year
- DeepTACT: predicting three-dimensional chromatin contacts via bootstrapping deep learning☆20Jul 23, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- FISH Iterative Cell Typing☆11Mar 24, 2024Updated 2 years ago
- ☆15Aug 9, 2023Updated 3 years ago
- Cross-modal generation of molecules from gene expression inputs. (Briefings in Bioinformatics 2024)☆11May 3, 2025Updated last year
- ☆29Jan 4, 2024Updated 2 years ago
- PAST: a Prior-based self-Attention method for Spatial Transcriptomics☆13Mar 1, 2025Updated last year
- A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from …☆27Jan 31, 2026Updated 6 months ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆16Dec 15, 2025Updated 7 months ago
- ☆10May 31, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Analysis of smFISH data☆12Aug 27, 2018Updated 7 years ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆26Updated this week
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 5 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆23Nov 10, 2021Updated 4 years ago
- A pipeline to select oligonucleotides for fluorescence in situ hybridization (Oligo-FISH).☆25Jul 16, 2026Updated 3 weeks ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆13Dec 13, 2024Updated last year
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 4 years ago
- mosaicMPI: mosaic multi-resolution program integration☆12Jul 9, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- javaweb课程设计大作业,教学课后辅导交流系统☆16May 15, 2019Updated 7 years ago
- ☆14Jan 25, 2023Updated 3 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- 总结和比较目前发表的处理单细胞空间转录组学(Spatial Transcriptomic)的聚类方法。Conclusion and comparison of the current clustering method for ST data.☆12May 31, 2023Updated 3 years ago
- Multi-Layer Network Model leverages identification of spatial domains from spatial transcriptomics data☆13Aug 25, 2024Updated last year
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Dec 11, 2025Updated 8 months ago
- Threshold independent detection and localization of diffraction-limited spots.☆39Apr 8, 2026Updated 4 months ago
- ☆13Dec 1, 2021Updated 4 years ago
- CAST package☆44Oct 26, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A study of performance of optimal transport.☆10Jul 4, 2020Updated 6 years ago
- ☆11Sep 7, 2023Updated 2 years ago
- Seqscope codes☆11Nov 28, 2021Updated 4 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆87Mar 5, 2022Updated 4 years ago
- ☆104May 4, 2026Updated 3 months ago
- EDF solves the multi-view features fusion problem by searching an optimal combination scheme of different basic fusion operators.☆11Jan 23, 2022Updated 4 years ago
- ☆12May 24, 2024Updated 2 years ago