asabjorklund / ILC_scRNAseq
Analysis of single cell RNA-seq data from innate lympoid cells
☆15Updated 7 years ago
Alternatives and similar repositories for ILC_scRNAseq:
Users that are interested in ILC_scRNAseq are comparing it to the libraries listed below
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- ☆16Updated 5 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆42Updated last year
- ☆28Updated 6 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- ☆20Updated 7 months ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- ☆18Updated 11 months ago
- ☆12Updated 7 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆31Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆42Updated last year
- ☆38Updated 4 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆38Updated 2 years ago
- Clone of the Bioconductor repository for the batchelor package.☆16Updated 7 months ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated 7 months ago
- Identified novel mouse spermatogenesis biomarkers based on single-cell RNA sequencing data☆11Updated 2 years ago
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Updated 5 years ago
- Cluster Identity Predictor (R package implementation)☆19Updated 2 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆35Updated 3 years ago
- R package for robust clustering of single cell RNA sequencing data☆38Updated last year
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆19Updated last year
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆23Updated 4 years ago
- Codes associated with the Poran, Nötzel et al. paper titled "Single-cell RNA-seq reveals a signature of sexual commitment in malaria para…☆10Updated 7 years ago
- Clone identification from single-cell data☆61Updated 2 years ago
- ☆10Updated 6 years ago
- Bead-based single-cell atac processing☆31Updated 3 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago