asabjorklund / ILC_scRNAseqLinks
Analysis of single cell RNA-seq data from innate lympoid cells
☆15Updated 8 years ago
Alternatives and similar repositories for ILC_scRNAseq
Users that are interested in ILC_scRNAseq are comparing it to the libraries listed below
Sorting:
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- R package for robust clustering of single cell RNA sequencing data☆40Updated 2 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆75Updated 2 years ago
- ☆28Updated 6 years ago
- Clone of the Bioconductor repository for the batchelor package.☆18Updated 9 months ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 5 months ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 6 years ago
- ☆55Updated 5 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆43Updated 3 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- Clone identification from single-cell data☆61Updated 3 years ago
- Clone of the Bioconductor repository for the scran package.☆45Updated last year
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆25Updated 5 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- scRNA-seq cell type identification☆43Updated 6 years ago
- ☆17Updated 6 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and S…☆44Updated last year
- ☆18Updated last year
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- mutation(barcode) caller for 10x single cell data☆44Updated 5 years ago
- ☆43Updated 4 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- Feature Ranking in (possibly large) Clustered Single Cell Data☆40Updated 4 years ago
- ☆14Updated last year
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆46Updated 9 years ago
- ☆50Updated 5 years ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago