SGI-LungCancer / SingleCellLinks
Code repository for single cell RNA-seq
☆35Updated 4 years ago
Alternatives and similar repositories for SingleCell
Users that are interested in SingleCell are comparing it to the libraries listed below
Sorting:
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 2 months ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆38Updated last year
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆61Updated 7 months ago
- ☆61Updated 5 years ago
- ☆66Updated 11 months ago
- A R package for advanced single cell data viz☆67Updated last year
- ☆32Updated 3 years ago
- ☆30Updated 3 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated 11 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- ☆45Updated 3 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆105Updated last month
- ☆49Updated 5 years ago
- Mollecular Functional Portraits☆41Updated last year
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Human Muscle Ageing Cell Atlas☆18Updated last year
- Repository for codes for the HBCA paper☆36Updated 2 years ago
- ☆22Updated last year
- ☆43Updated 10 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- scWGCNA☆61Updated 2 years ago
- Visualize the results of cell-cell communication analysis☆22Updated 2 years ago
- ☆81Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆66Updated 8 months ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆49Updated 3 years ago