youlab / pattern_prediction_NN_Shangying
Use LSTM neural network for 1D distributional data prediction
☆22Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for pattern_prediction_NN_Shangying
- generalized principal component analysis (GLM-PCA) implemented in python☆57Updated 3 years ago
- Initialization is critical for preserving global data structure in both t-SNE and UMAP☆21Updated 3 years ago
- Probabilistic contrastive principal component analysis (PCPCA)☆24Updated 3 years ago
- Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…☆17Updated last year
- ☆12Updated 2 years ago
- Tools for building and manipulating graphs in Python☆41Updated last year
- ☆14Updated last year
- ☆11Updated last year
- D-CODE: Discovering Closed-form ODEs from Observed Trajectories☆14Updated 2 years ago
- Splotch is a hierarchical generative probabilistic model for analyzing Spatial Transcriptomics (ST) data☆17Updated 3 weeks ago
- A package for making MuE observation models in Edward2.☆13Updated 3 years ago
- CellBox: Interpretable Machine Learning for Perturbation Biology☆54Updated last year
- pyGPCCA - python GPCCA: Generalized Perron Cluster Cluster Analysis package to coarse-grain reversible and non-reversible Markov state mo…☆21Updated this week
- Online Principal Component Analysis☆22Updated 2 years ago
- Categorical Variational Autoencoders☆23Updated 2 years ago
- Dynamic inference from single-cell snapshots by optimal transport☆15Updated 8 months ago
- Imputation of single cell RNA-sequencing data with autoencoder☆16Updated 3 years ago
- Contrastive Poisson latent variable models (CPLVMs)☆11Updated 2 years ago
- Dynamic Flux Balance analysis in Python☆11Updated 8 years ago
- Biologically-informed neural networks☆24Updated 3 years ago
- Implementation of Fibered Auto-Encoders☆9Updated 3 years ago
- This R code implements the GSPPCA algorithm for high-dimensional unsupervised feature selection.☆10Updated 4 years ago
- PyTorch implementation of BasisVAE: Translation-invariant feature-level clustering with Variational Autoencoders☆40Updated 4 years ago
- Machine learning framework for predicting the responses of drug combinations in pre-clinical studies, such as those based on cell lines o…☆26Updated 4 years ago
- Fast Inference of Networks from Directed Regulations☆21Updated 11 months ago
- A simulation framework to analyze signal flows in complex networks☆13Updated last year
- Fast computation of diffusion maps and geometric harmonics in Python. Moved to https://git.sr.ht/~jmbr/diffusion-maps☆41Updated 3 years ago
- Framework for integrating heterogeneous modalities of data☆16Updated 2 years ago
- A Library for Denoising Single-Cell Data with Random Matrix Theory☆36Updated last year