scEntropy method and scEGMM framework
☆18Oct 26, 2019Updated 7 years ago
Alternatives and similar repositories for scEntropy
Users that are interested in scEntropy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- Lung cancer 10X analysis☆11Dec 30, 2020Updated 5 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆20Jan 6, 2026Updated 9 months ago
- Visualize the results of cell-cell communication analysis☆26Jan 21, 2023Updated 3 years ago
- A deep learning architecture for robust inference and accurate prediction of cellular dynamics☆89Jul 20, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆11Sep 20, 2022Updated 4 years ago
- A classifier for tumor microenvironment subtype based on ensemble machine learning models☆11Jul 20, 2025Updated last year
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- Implementation of Seurat's SpatialFeaturePlot to allow blended expression☆11Feb 28, 2025Updated last year
- ☆17Jul 8, 2024Updated 2 years ago
- ☆30Jul 15, 2021Updated 5 years ago
- simpler single cell RNAseq data Visualization☆12Feb 28, 2025Updated last year
- CCCvelo: Decoding dynamic cell-cell communication-driven cell state transitions in spatial transcriptomics☆13Sep 14, 2026Updated last month
- Quantifying metabolism activity at the single-cell resolution☆201Aug 20, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R package for Protein activity analysis of single-cell RNAseq.☆90Sep 26, 2026Updated last month
- Improved bioinformatic pipeline to identify and quantify circRNA expression from RNA-seq data by combining multiple circRNA detection met…☆11Nov 7, 2025Updated 11 months ago
- scSurvival is a new tool for survival analysis from single cell cohort dataset.☆28Apr 27, 2026Updated 6 months ago
- Automatic selection of number of principal components☆17Jun 27, 2022Updated 4 years ago
- ☆38Jan 3, 2025Updated last year
- ☆15Aug 16, 2026Updated 2 months ago
- ☆15Jan 18, 2023Updated 3 years ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆15Jan 27, 2023Updated 3 years ago
- Secreted Protein Activity Inference☆34Jul 31, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆16Mar 2, 2023Updated 3 years ago
- ☆42Sep 21, 2026Updated last month
- ☆12Oct 4, 2021Updated 5 years ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆17Feb 25, 2019Updated 7 years ago
- SCISSORS builds upon the Louvain graph-based clustering in Seurat by optimizing parameter selection when reclustering cell groups, with a…☆17May 5, 2026Updated 5 months ago
- R package for metabolic enzyme enrichment anaylsis☆14Oct 24, 2025Updated last year
- Fast phenograph, CyTOF☆26Aug 19, 2022Updated 4 years ago
- ☆66Jul 23, 2024Updated 2 years ago
- ☆62Dec 27, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆66Aug 6, 2025Updated last year
- analysis script for GBM single cell RNA seq data☆22May 26, 2021Updated 5 years ago
- A tool for semi-automatic cell type harmonization and integration☆125Mar 9, 2026Updated 7 months ago
- ☆43Jun 11, 2022Updated 4 years ago
- Tutorials for the Monod package, which fits CME models to sequencing data.☆16Mar 19, 2025Updated last year
- An eXplainable Cell-specific machine learning method to predict clinical Phenotypes using single-cell multi-omics☆17Sep 23, 2025Updated last year
- ☆17Sep 29, 2023Updated 3 years ago