jordisr / poreoverLinks
Nanopore basecalling and consensus decoding
☆46Updated 2 years ago
Alternatives and similar repositories for poreover
Users that are interested in poreover are comparing it to the libraries listed below
Sorting:
- Nanopore raw signal repeat detection pipeline☆45Updated 2 years ago
- Very fast ONT basecaller☆53Updated 3 years ago
- Predictive kmer models for development use☆58Updated 2 years ago
- A python program to call methylation (m6A in DNA) from nanopore signal data☆47Updated 4 years ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Updated 3 years ago
- Analysis pipelines from Oxford Nanopore Technologies' Research Division☆50Updated 4 years ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆46Updated 6 years ago
- A short analysis of Oxford Nanopore consensus accuracy for bacterial genome assemblies☆59Updated 5 years ago
- Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing☆57Updated last year
- Python client library for Guppy☆31Updated 2 years ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- Fast5 API provided by ONT Research☆22Updated 3 years ago
- ☆49Updated 7 months ago
- Flip-flop basecaller for Oxford Nanopore reads☆99Updated 3 years ago
- SquiggleKit: A toolkit for manipulating nanopore signal data☆125Updated last year
- RNA modifications detection from Nanopore dRNA-Seq data☆85Updated last month
- Training models for basecalling Oxford Nanopore reads☆115Updated 3 years ago
- Peregrine: Fast Genome Assembler Using SHIMMER Index☆101Updated 3 years ago
- Research release basecalling models and configurations☆113Updated last month
- Analysis components from Oxford Nanopore Research☆93Updated 9 months ago
- A tool for Racon polishing of miniasm assemblies☆76Updated 3 weeks ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores☆72Updated last year
- Tools to annotate genomes using long read transcriptomics data☆45Updated 4 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- ☆30Updated last year
- Visualise and analyse nanopore (ONT) raw signals☆117Updated this week
- Python bindings to bwa mem☆32Updated 5 years ago
- ☆68Updated 5 months ago
- Pipeline to convert a haploid assembly into diploid☆100Updated 5 months ago