Moonerss / CIBERSORTView external linksLinks
☆43Nov 29, 2025Updated 2 months ago
Alternatives and similar repositories for CIBERSORT
Users that are interested in CIBERSORT are comparing it to the libraries listed below
Sorting:
- R package for tissue-specific gene enrichment☆15Mar 10, 2022Updated 3 years ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆59Jul 22, 2024Updated last year
- Visualize the results of cell-cell communication analysis☆24Jan 21, 2023Updated 3 years ago
- reorganize paper of deconvolution method☆11Dec 14, 2023Updated 2 years ago
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 5 years ago
- digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data☆15Oct 31, 2024Updated last year
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆12Jan 5, 2023Updated 3 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated 10 months ago
- Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files☆13Jan 31, 2016Updated 10 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆30Jul 13, 2023Updated 2 years ago
- ☆63Dec 27, 2023Updated 2 years ago
- A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution method…☆521Jan 5, 2026Updated last month
- ☆17Sep 4, 2024Updated last year
- ☆16Mar 2, 2023Updated 2 years ago
- R package for WikiPathways API☆17Nov 3, 2025Updated 3 months ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Dec 3, 2018Updated 7 years ago
- An awesome list of learning resources for bioinformatics, genomics and computational biology☆22Aug 29, 2025Updated 5 months ago
- ☆15Jul 25, 2025Updated 6 months ago
- SCSA: cell type annotation for single-cell RNA-seq data☆94Apr 11, 2023Updated 2 years ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics☆540Oct 7, 2025Updated 4 months ago
- R/Bioconductor package including the Gene Expression Signature Search (GESS), Function Enrichment Analysis (FEA) methods and supporting d…☆21Feb 3, 2026Updated last week
- ☆15Apr 26, 2022Updated 3 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆19Aug 9, 2023Updated 2 years ago
- GEO RNA-seq Experiments Processing Pipeline☆22Oct 25, 2019Updated 6 years ago
- ☆17Jan 13, 2024Updated 2 years ago
- IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.☆276Jan 3, 2026Updated last month
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆237May 8, 2023Updated 2 years ago
- Find CNVs in single cell sequencing data.☆18Apr 4, 2023Updated 2 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Apr 6, 2025Updated 10 months ago
- ☆18Feb 6, 2026Updated last week
- R package for analysing proteomics data☆50Apr 17, 2023Updated 2 years ago
- Feature Ranking in (possibly large) Clustered Single Cell Data☆40Apr 15, 2021Updated 4 years ago
- Draw phylogenetic trees of tumor evolution☆87Jul 21, 2023Updated 2 years ago
- ☆59Jun 21, 2022Updated 3 years ago
- Shiny Interactive Web Apps for Single-Cell Data☆203Apr 24, 2025Updated 9 months ago
- ☆25Jan 18, 2022Updated 4 years ago
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆95Jun 22, 2022Updated 3 years ago
- R package to access DoRothEA's regulons☆155Feb 24, 2024Updated last year