A fast and accurate RNA secondary structure, end-to-end approach prediction method.
☆12Jan 2, 2025Updated last year
Alternatives and similar repositories for sincFold
Users that are interested in sincFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Differentiable RNA folding in JAX☆28Mar 25, 2025Updated last year
- ☆22Dec 20, 2024Updated last year
- Evolcust retrieves groups of genes that appear clustered together in groups of species☆16Oct 21, 2022Updated 3 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆18Dec 13, 2024Updated last year
- RNA Structural Covariation Above Phylogenetic Expectation☆19Dec 12, 2025Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- interactive Multi Objective K-mer Analysis☆24Mar 5, 2023Updated 3 years ago
- ☆12Feb 13, 2019Updated 7 years ago
- ☆12Updated this week
- Secondary structure prediction of long non-coding RNA: review and experimental comparison of existing approaches, L.A. Bugnon, A.A. Edera…☆20Mar 17, 2024Updated 2 years ago
- A motif discovery tool to detect the occurrences of known motifs☆20Jan 21, 2021Updated 5 years ago
- GCNfold: A novel lightweight model with valid extractors for RNA secondary structure prediction☆14Jul 23, 2023Updated 2 years ago
- A simulation developed from scratch using Pygame to simulate the movement of vehicles across a traffic intersection having traffic lights…☆25Mar 11, 2021Updated 5 years ago
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆51Nov 23, 2023Updated 2 years ago
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Aug 24, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- BPfold: Deep generalizable prediction of RNA secondary structure via base pair motif energy.☆34Apr 15, 2026Updated 2 weeks ago
- ☆28Mar 30, 2026Updated last month
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆62Aug 2, 2024Updated last year
- A de novo prediction tool of chromatin accessible regions for plant genomes☆10Aug 12, 2021Updated 4 years ago
- ☆13Jun 5, 2024Updated last year
- A python package implements scTenifoldnet and scTenifoldknk☆56Oct 18, 2022Updated 3 years ago
- Network Visualization using both GUI and Programming☆29May 27, 2025Updated 11 months ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Jun 4, 2018Updated 7 years ago
- A tool to infer TF regulators for gene modules.☆10May 11, 2021Updated 4 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- Draw RNA secondary structures in python.☆52Jun 24, 2025Updated 10 months ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- ☆12Mar 21, 2026Updated last month
- Repository for the UTN BA Data Science Course 2020☆14Jun 28, 2021Updated 4 years ago
- Detecting Archaic Introgression from Population Genetic Data with S*☆10Mar 10, 2026Updated last month
- ☆37Sep 21, 2023Updated 2 years ago
- Annotation of cryptic transposon variants using Hidden Markov Models to detect conserved terminal features.☆10Apr 20, 2026Updated last week
- ☆14Nov 24, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆67Jul 17, 2024Updated last year
- A Kotlin DSL to create and plot RNA 2D structures. The drawing engine behind RNArtist to be used from the command line.☆30Mar 23, 2026Updated last month
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆107May 23, 2025Updated 11 months ago
- A tool for detecting CNVs from WGS data☆11Jul 9, 2020Updated 5 years ago
- Human pan-genome analysis pipeline☆31Apr 30, 2020Updated 6 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- Obsolete!! Begin to turn to PrimerServer2☆10Jul 22, 2019Updated 6 years ago