A fast and accurate RNA secondary structure, end-to-end approach prediction method.
☆13Jan 2, 2025Updated last year
Alternatives and similar repositories for sincFold
Users that are interested in sincFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Dec 20, 2024Updated last year
- Evolcust retrieves groups of genes that appear clustered together in groups of species☆16Oct 21, 2022Updated 3 years ago
- Differentiable RNA folding in JAX☆31Mar 25, 2025Updated last year
- RNA Structural Covariation Above Phylogenetic Expectation☆24Updated this week
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Dec 13, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- GCNfold: A novel lightweight model with valid extractors for RNA secondary structure prediction☆13Jul 23, 2023Updated 3 years ago
- Very flexible tools for plotting and analyzing all kinds of RNA structure data☆16Jul 31, 2026Updated last week
- A motif discovery tool to detect the occurrences of known motifs☆20Jan 21, 2021Updated 5 years ago
- ☆12Feb 13, 2019Updated 7 years ago
- interactive Multi Objective K-mer Analysis☆25Mar 5, 2023Updated 3 years ago
- ☆13Jul 30, 2026Updated last week
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- Secondary structure prediction of long non-coding RNA: review and experimental comparison of existing approaches, L.A. Bugnon, A.A. Edera…☆21Mar 17, 2024Updated 2 years ago
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Aug 24, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Detecting Archaic Introgression from Population Genetic Data with S*☆10Jul 10, 2026Updated last month
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆52Nov 23, 2023Updated 2 years ago
- A de novo prediction tool of chromatin accessible regions for plant genomes☆10Aug 12, 2021Updated 4 years ago
- ☆27Jul 15, 2026Updated 3 weeks ago
- BPfold: Deep generalizable prediction of RNA secondary structure via base pair motif energy.☆35May 27, 2026Updated 2 months ago
- Network Visualization using both GUI and Programming☆29Jul 3, 2026Updated last month
- ☆10Aug 5, 2022Updated 4 years ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Jun 4, 2018Updated 8 years ago
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A tool to infer TF regulators for gene modules.☆11May 11, 2021Updated 5 years ago
- Human pan-genome analysis pipeline☆30Apr 30, 2020Updated 6 years ago
- ☆12Mar 21, 2026Updated 4 months ago
- ☆14Jun 5, 2024Updated 2 years ago
- Repository for the UTN BA Data Science Course 2020☆15Jun 28, 2021Updated 5 years ago
- Draw RNA secondary structures in python.☆54Jun 24, 2025Updated last year
- Annotation of cryptic transposon variants using Hidden Markov Models to detect conserved terminal features.☆10Updated this week
- ☆37Sep 21, 2023Updated 2 years ago
- A tool for detecting CNVs from WGS data☆11Jul 9, 2020Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆14Updated this week
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆106May 23, 2025Updated last year
- Obsolete!! Begin to turn to PrimerServer2☆10Jul 22, 2019Updated 7 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- All JBrowse plugins created by Brigitte Hofmeister☆10Apr 27, 2018Updated 8 years ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆71Jun 16, 2026Updated last month
- a toolkit for evaluation of the lenght of k-mer in a given genome dataset for alignment-free phylogenimic analysis.☆15Nov 21, 2024Updated last year