MASIC generates selected ion chromatograms (SICs) for all of the parent ions chosen for fragmentation in an LC-MS/MS analysis, characterizing the peak(s) in each SIC, computing peak statistics including elution time of the peak apex, peak area, and peak signal/noise. It can also extract reporter ion abundances (e.g. iTRAQ or TMT).
☆18Dec 4, 2025Updated 8 months ago
Alternatives and similar repositories for MASIC
Users that are interested in MASIC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 6 years ago
- Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering☆12May 4, 2019Updated 7 years ago
- Organic/biological mass spectrometry data analysis (development version).☆33Jan 27, 2026Updated 6 months ago
- C# Mass Spectrometry Library☆41Jun 14, 2022Updated 4 years ago
- Python script for calling SNPs, MNPs, and indels in mitochondrial DNA.☆10Apr 19, 2016Updated 10 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Transform data from RCSB Protein Data Bank for secondary structure prediction☆12Feb 20, 2019Updated 7 years ago
- Pipeline to call somatic cancer neoantigens from mutations in patient tumor DNA☆14Feb 16, 2023Updated 3 years ago
- Integration ribosome profiling - mass spectrometry☆15Nov 4, 2025Updated 9 months ago
- RNAseq pipeline for alternative splicing junctions☆15Mar 26, 2026Updated 4 months ago
- Freddie: Annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing☆17Nov 29, 2022Updated 3 years ago
- CRISPR Indel, base edit analysis☆11Aug 1, 2020Updated 6 years ago
- ECML16: GaKCo: a Fast Gapped k-mer string Kernel using Counting☆14Aug 28, 2019Updated 6 years ago
- CHANGE-seq analysis pipeline☆12Dec 18, 2025Updated 7 months ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆10Sep 11, 2020Updated 5 years ago
- ☆13Oct 3, 2017Updated 8 years ago
- ☆13Mar 19, 2024Updated 2 years ago
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated 2 years ago
- ☆16Jul 2, 2026Updated last month
- Software developed at the Max Planck Institut für Eisenforschung☆13Jul 18, 2025Updated last year
- Wrapper to access InChI from Java☆10Jul 26, 2026Updated 2 weeks ago
- scRNA-seq Shiny App☆14May 1, 2023Updated 3 years ago
- An unbiased method for genome-wide CBE off-targets assessment☆13Mar 9, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆20Sep 28, 2019Updated 6 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆29Sep 20, 2022Updated 3 years ago
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- Python library for parsing eLife article XML data.☆15Jul 14, 2026Updated 3 weeks ago
- A deep learning-based lncRNA subcellular localization predictor☆16Aug 17, 2022Updated 3 years ago
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- Voyager 1 is a space probe that was launched by NASA on September 5, 1977. Part of the Voyager program to study the outer Solar System, V…☆15Jul 14, 2026Updated 3 weeks ago
- ☆17Feb 3, 2020Updated 6 years ago
- Digenome-toolkit ver2.☆15Nov 1, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆23Apr 1, 2026Updated 4 months ago
- The source code for the API demo that we did in the OR2016 dev track☆14May 2, 2017Updated 9 years ago
- Text mining tool to retrieve protein-protein interactions from the scientific literature.☆13Jun 9, 2019Updated 7 years ago
- A browser extension providing Open Access bibliographical services☆18Dec 9, 2022Updated 3 years ago
- A Framework for IMS-MS Raw Data Processing written in Rust and Python.☆23Updated this week
- The source codes for our paper submitted to Neurocomputing in 2017. We propose a linear label propagation method (LPLNP method) to predic…☆18Jun 5, 2017Updated 9 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆26May 30, 2023Updated 3 years ago