Alternatives and similar repositories for OmicsEV

Users that are interested in OmicsEV are comparing it to the libraries listed below

• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆41Updated last week
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆49Updated 2 years ago
• const-ae / proDA
  Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/
  ☆20Updated last year
• mildpiggy / DEP2
  An r package for proteomics data Analysis, developed from DEP.
  ☆29Updated 2 months ago
• dakwok / SSNIP
  The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…
  ☆19Updated last month
• cansysbio / ConsensusTME
  ConsensusTME Gene Sets and R Script
  ☆39Updated 11 months ago
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆15Updated 10 months ago
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆61Updated 2 months ago
• kenichi-shimada / depmap-analysis
  This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…
  ☆13Updated 3 years ago
• wmacnair / SampleQC
  Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data
  ☆37Updated 2 years ago
• shenorrLabTRDF / bseqsc
  Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline
  ☆45Updated last year
• WangLab-MSSM / DreamAI
  Imputation of missing values of a matrix or data.frame using iterative prediction model
  ☆33Updated 3 months ago
• broadinstitute / PANOPLY
  Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…
  ☆37Updated last week
• lagelab / Genoppi
  Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data
  ☆26Updated last year
• KChen-lab / METAFlux
  ☆66Updated 11 months ago
• DavisLaboratory / msImpute
  Methods for label-free mass spectrometry proteomics
  ☆15Updated 2 months ago
• omicsCore / scTyper
  scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data
  ☆30Updated 2 years ago
• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆52Updated 2 years ago
• angelettilab / scMouseBcellFlu
  ☆18Updated 3 years ago
• hartwigmedical / platinum
  Run multiple Pipeline5 instances at once
  ☆10Updated 3 months ago
• SlavovLab / SCoPE2
  ☆18Updated last month
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆21Updated 3 years ago
• Xiang-HF-Zhang / Dichotomous-of-innate-immune-landscape
  Dichotomous of innate immune landscape
  ☆17Updated 5 years ago
• ChengLiLab / SCALE
  A tissue-specific single-cell biological age model
  ☆11Updated last year
• Teichlab / cell2tcr
  Inference of TCR motifs
  ☆30Updated last month
• zwj-tina / GEPIA2021
  ☆15Updated 3 years ago
• MonashBioinformaticsPlatform / LFQ-Analyst
  The repo for LFQ-Analyst
  ☆30Updated 9 months ago
• rnabioco / djvdj
  An R package to analyze single-cell V(D)J data
  ☆28Updated last year
• foreverdream2 / dysfunction_interaction_test
  ☆29Updated 6 years ago
• frattalab / splicing
  Snakemake pipeline for running MAJIQ
  ☆23Updated last year