ejh243 / BrainFANSLinks
Complex Disease Epigenomics Group's quality control and analysis pipelines for DNA methylation arrays, SNP arrays, BS-Seq, ATAC-Seq and ChIP-Seq
☆11Updated this week
Alternatives and similar repositories for BrainFANS
Users that are interested in BrainFANS are comparing it to the libraries listed below
Sorting:
- Metagenome sequencing pipeline 宏基因组分析流程☆11Updated 3 years ago
- ☆14Updated 6 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Updated 4 years ago
- Snakemake pipeline for the preprocessing, alignment, QC, and quantification of spatial transcriptomics data - both short-read and long-re…☆11Updated 2 months ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆21Updated 3 years ago
- ☆10Updated 2 years ago
- ☆14Updated 3 years ago
- Human brain, >200,000 nuclei☆23Updated 4 years ago
- ☆55Updated last week
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆30Updated 6 years ago
- This repository contained single-cell RNA-seq datasets with ICB treated patients☆13Updated last year
- ☆48Updated last year
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- Analysis and visualization of RNA-Seq results☆30Updated last month
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- ☆18Updated 6 years ago
- GEO RNA-seq Experiments Processing Pipeline☆22Updated 6 years ago
- R package for tissue-specific gene enrichment☆15Updated 3 years ago
- ☆41Updated 7 years ago
- ☆27Updated 8 months ago
- GSCALite: Gene set for cancer analysis☆23Updated 3 years ago
- Calculating Tumor microenvironment score☆29Updated 3 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆54Updated 3 weeks ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13Updated 4 years ago
- ☆29Updated 2 years ago
- This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.☆41Updated 4 years ago
- ☆24Updated 4 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆32Updated 4 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- Identify and correct invalid gene symbols☆62Updated last year