Guided construction of single cell reference
☆16Jul 3, 2023Updated 3 years ago
Alternatives and similar repositories for CellRef
Users that are interested in CellRef are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆36Nov 29, 2021Updated 4 years ago
- ☆10Nov 5, 2023Updated 2 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆34Jul 13, 2024Updated 2 years ago
- Supplementary files and notebooks to recreate figures.☆21Jun 15, 2026Updated last month
- Cell type purification by single-cell transcriptome-trained sorting☆16Jul 8, 2019Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Vaeda method for computational doublet annotation☆20Feb 1, 2026Updated 5 months ago
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters an…☆48Apr 8, 2022Updated 4 years ago
- R package for single-cell comparative regulatory analysis☆12Jun 26, 2021Updated 5 years ago
- scSurvival is a new tool for survival analysis from single cell cohort dataset.☆24Apr 27, 2026Updated 2 months ago
- ☆16Jul 9, 2024Updated 2 years ago
- deMULTIplex2: robust sample demultiplexing for scRNA-seq☆20Mar 12, 2026Updated 4 months ago
- ☆15Apr 11, 2024Updated 2 years ago
- ☆64Jul 6, 2021Updated 5 years ago
- A versatile and lightning fast package for processing 10X, inDrop and Drop-seq data.☆14Feb 3, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Data analysis for the moscot-framework project☆25Feb 27, 2026Updated 4 months ago
- ☆20Sep 29, 2021Updated 4 years ago
- ☆17Jun 17, 2021Updated 5 years ago
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆19Jan 16, 2026Updated 6 months ago
- R package for large-scale CNV analysis from RNA-seq☆20Dec 21, 2023Updated 2 years ago
- This is a web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on …☆15Sep 24, 2019Updated 6 years ago
- SKATE R Utilities☆10Mar 7, 2026Updated 4 months ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆17Mar 17, 2026Updated 4 months ago
- Some NGS workflow created by snakemake☆14Jun 30, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆26Aug 24, 2023Updated 2 years ago
- Differential expression analysis for single-cell RNA-seq data☆17Feb 15, 2019Updated 7 years ago
- Lightweight pipeline for processing droplet-based single-cell RNA-seq data☆18Nov 4, 2020Updated 5 years ago
- ☆19May 25, 2026Updated 2 months ago
- A computational framework☆18Updated this week
- Final repository for the project "Unsupervised Machine Learning for the Classification of Astrophysical X-ray Sources". V. S. Pérez-Díaz,…☆10Jan 23, 2024Updated 2 years ago
- Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it …☆22Feb 14, 2023Updated 3 years ago
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆66Dec 7, 2022Updated 3 years ago
- ☆12Sep 4, 2025Updated 10 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- CODAvision - open source medical image labeling tool☆21Jul 17, 2026Updated last week
- ☆12Jul 10, 2022Updated 4 years ago
- Critical downstream analysis steps for single-cell RNA sequencing data☆13Feb 21, 2021Updated 5 years ago
- ☆13Aug 30, 2023Updated 2 years ago
- Implementation of MaSigPro for scRNA-Seq Data☆20Jul 31, 2024Updated last year
- inferring regulatory cellular dynamics☆176Updated this week
- Scripts used to generate the data/figures contained in "Single Cell Transcriptomics Reveals Cell Type Specific Diversification in Human H…☆15Mar 10, 2023Updated 3 years ago