Alternatives and similar repositories for pbs-torque

Users that are interested in pbs-torque are comparing it to the libraries listed below

• Snakemake-Profiles / doc
  Documentation of the Snakemake-Profiles project.
  ☆54Updated 3 years ago
• carpentries-incubator / snakemake-novice-bioinformatics
  Introduction to Snakemake for Bioinformatics
  ☆21Updated last week
• brentp / fishers_exact_test
  Fishers Exact Test for Python (Cython)
  ☆66Updated 8 months ago
• snakemake / snakemake-github-action
  A Github action for running a Snakemake workflow
  ☆62Updated this week
• snakemake-workflows / cookiecutter-snakemake-workflow
  A cookiecutter template for Snakemake workflows
  ☆60Updated 3 years ago
• snakemake-workflows / snakemake-workflow-template
  A template for standard compliant snakemake-workflows
  ☆117Updated last month
• ctb / 2019-snakemake-ucdavis
  Intro to workflows for efficient automated data analysis, using snakemake.
  ☆32Updated 6 years ago
• markziemann / dee2
  Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data
  ☆41Updated 2 weeks ago
• Snakemake-Profiles / slurm
  Cookiecutter for snakemake slurm profile
  ☆134Updated last year
• jorainer / ensembldb
  This is the ensembldb development repository.
  ☆36Updated 3 months ago
• dpryan79 / Misc
  Misc. utilities
  ☆11Updated 6 years ago
• gogetdata / ggd-cli
  The command-line interface to GGD
  ☆43Updated 3 years ago
• deto / Snakemake_Tutorial
  A short tutorial on getting started with Snakemake for workflow management
  ☆57Updated 6 years ago
• jbloomlab / dmslogo
  draw sequence logos tailored to deep mutational scanning (DMS) data
  ☆12Updated 2 years ago
• ejfertig / NSFBiosketch
  R markdown file to extract list of collaborators and affiliations from pubmed for NSF biosketch
  ☆38Updated 8 years ago
• olgabot / awesome-expectations
  Examples of great academic lab expectations, manuals, policies for joining and being in the lab
  ☆51Updated 6 years ago
• biomart / BioMart
  ☆21Updated 9 years ago
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 5 years ago
• GSEA-MSigDB / gsea-desktop
  Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statisticall…
  ☆38Updated 9 months ago
• statgen / fastQValidator
  Validate FastQ Files
  ☆36Updated 7 years ago
• widdowquinn / ten_great_papers
  Ten great papers for wet lab biologists starting out in computational biology
  ☆52Updated 6 years ago
• cgat-developers / cgat-core
  Core functionality of the CGAT code
  ☆34Updated 3 months ago
• JetBrains-Research / snakecharm
  Plugin for PyCharm / IntelliJ IDEA Platform IDEs which adds support for Snakemake language.
  ☆62Updated 3 months ago
• nellore / rail
  Scalable RNA-seq analysis
  ☆73Updated 4 years ago
• nh13 / snakeparse
  Making Snakemake workflows into full-fledged command line tools since 1999.
  ☆51Updated 7 years ago
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 8 years ago
• dnanexus-archive / dx-cwl
  Import and run CWL workflows on DNAnexus (alpha)
  ☆13Updated 7 years ago
• leipzig / SandwichesWithSnakemake
  This is a beginner's tutorial to Snakemake
  ☆70Updated 9 years ago
• salmonteam / SalmonBlogResponse
  Response to blog post about Salmon
  ☆37Updated 8 years ago