Scripts and notebooks for Qin & Cardoso Rodriguez et al
☆11Dec 7, 2023Updated 2 years ago
Alternatives and similar repositories for Qin-CardosoRodriguez-et-al
Users that are interested in Qin-CardosoRodriguez-et-al are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Aug 2, 2023Updated 3 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆41Sep 5, 2021Updated 5 years ago
- ☆15Sep 18, 2026Updated last month
- stageR package☆13May 8, 2026Updated 5 months ago
- ☆21Aug 20, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- RAGE-seq scripts☆18Aug 30, 2021Updated 5 years ago
- ☆19Oct 26, 2021Updated 4 years ago
- ☆20May 20, 2021Updated 5 years ago
- ☆11Dec 8, 2023Updated 2 years ago
- Processing pipeline scripts for sci-RNA-seq3 (bash, R, python)☆45Apr 14, 2021Updated 5 years ago
- Spatial Transcriptomic Analysis of OSCC samples☆29Dec 24, 2025Updated 9 months ago
- This repository contains the scripts for reproducing the results presented in Costa AC, Ahamed T, Jordan D, Stephens GJ (2023) "A Markov…☆11Sep 25, 2025Updated last year
- PROST: A quantitative pattern recognition framework for spatial transcriptomics.☆11Jun 27, 2024Updated 2 years ago
- Comparison of single-cell normalization methods using multiple datasets with ground-truth labels☆19Dec 2, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This python package is for transitioning bioconductor from SVN to git☆14Mar 15, 2023Updated 3 years ago
- Powerful and lightweight package to identify tissue compartments in spatial transcriptomics datasets.☆22Jun 9, 2025Updated last year
- ☆14Mar 18, 2022Updated 4 years ago
- ☆13Apr 13, 2020Updated 6 years ago
- Creating multi-resolution embeddings and clusters from high dimensional data☆59Sep 27, 2024Updated 2 years ago
- More robust R programming, testing and debugging☆16Feb 26, 2016Updated 10 years ago
- Dynamical information enables inference of gene regulation at single-cell scale☆12Jun 9, 2025Updated last year
- Single-cell Graph Cuts Optimization☆17Apr 27, 2024Updated 2 years ago
- Neural Crest Fate Decisions☆11Jul 9, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Simulate biological cells☆22Oct 23, 2025Updated 11 months ago
- Python package to infer tensions and pressures from 3D microscopy images of embryos and tissues☆15Oct 3, 2026Updated 2 weeks ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Jul 26, 2017Updated 9 years ago
- GCtree: phylogenetic inference of genotype-collapsed trees☆18Aug 27, 2024Updated 2 years ago
- Publically accessible code for DIISCO method☆13Oct 15, 2025Updated last year
- R implementation of GeneTrajectory☆72May 9, 2026Updated 5 months ago
- Landscape dynamic network biomarkers☆14Sep 21, 2017Updated 9 years ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Jun 23, 2016Updated 10 years ago
- Advanced R / Bioconductor training material☆20Mar 15, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A modified version of the level-set-methods-toolbox developed by Ian M. Mitchell☆13Nov 14, 2020Updated 5 years ago
- Code repository for single cell RNA-seq☆42Oct 12, 2020Updated 6 years ago
- ☆10Apr 10, 2016Updated 10 years ago
- ☆17Jun 24, 2021Updated 5 years ago
- Algorithms for identifying coherent structures in sparse and noisy trajectory datasets☆17Oct 22, 2021Updated 4 years ago
- VT3D: a versatile Visualization Toolbox for 3D spatial transcriptomics atlas☆14Nov 6, 2024Updated last year
- Neuroimaging in R Talk☆10Apr 9, 2016Updated 10 years ago