Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer
☆18Nov 30, 2024Updated last year
Alternatives and similar repositories for NEPAL
Users that are interested in NEPAL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…☆15Apr 23, 2024Updated 2 years ago
- ☆33Jul 17, 2021Updated 5 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆90Sep 26, 2026Updated 2 weeks ago
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- Code required to reproduce the analysis made in Kiviaho et al. 2024☆12Nov 29, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Identification and Validation Robust Prognostic Biomarkers and Signatures in Solid Tumors☆62Apr 1, 2025Updated last year
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆82Dec 16, 2023Updated 2 years ago
- ☆13Mar 5, 2024Updated 2 years ago
- ☆39Sep 20, 2022Updated 4 years ago
- ☆39Jun 4, 2024Updated 2 years ago
- Multimodality Fusion Subtyping (Nature Communications)☆33Aug 11, 2026Updated 2 months ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Jan 20, 2022Updated 4 years ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆150Jul 19, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆17Feb 3, 2020Updated 6 years ago
- PCaDB - a comprehensive and interactive database for transcriptomes from prostate cancer population cohorts☆10Dec 29, 2021Updated 4 years ago
- The GEO Cancer Analysis Suite (GCAS) is a versatile R package designed for analyzing and visualizing gene expression data in cancer resea…☆22Sep 5, 2026Updated last month
- ☆14Apr 22, 2021Updated 5 years ago
- CellNet, for cancer☆11Jul 14, 2022Updated 4 years ago
- R code used to analyze single cell PDAC data☆43Jun 29, 2024Updated 2 years ago
- Repository to store code used for the analyses presented in "Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic …☆22May 17, 2025Updated last year
- ☆60Feb 23, 2024Updated 2 years ago
- scRNA analysis of public dataset on bladder cancer☆20Dec 12, 2025Updated 10 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆54Jan 16, 2020Updated 6 years ago
- Codes used in pan-T cell analysis☆69Mar 13, 2023Updated 3 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Jun 21, 2022Updated 4 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆17Feb 17, 2021Updated 5 years ago
- Profile and Heatmap Visualization by Using ggplot2 and grid☆13Nov 21, 2023Updated 2 years ago
- Transcriptomic classifier for Muscle-Invasive Bladder Cancer☆17Oct 5, 2022Updated 4 years ago
- ☆22Jan 16, 2026Updated 8 months ago
- ☆63Aug 8, 2024Updated 2 years ago
- ☆13Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Multi-sample Unified Discriminant ANalysis☆75Apr 11, 2023Updated 3 years ago
- Pseudotime Analysis for Bulk Data☆19Aug 2, 2024Updated 2 years ago
- An R package for visualising cell-cell interactions☆47Mar 16, 2026Updated 6 months ago
- A pipeline for scRNA-seq data analysis☆16Mar 26, 2025Updated last year
- LncmiRSRN: Identifying lncRNA related miRNA sponge regulatory network☆14Feb 15, 2022Updated 4 years ago
- ☆16Aug 11, 2025Updated last year
- ☆23Oct 23, 2023Updated 2 years ago