DC-analysis / fcswrite
Python package for writing flow cytometry standard (.fcs) files
☆10Updated 4 months ago
Alternatives and similar repositories for fcswrite:
Users that are interested in fcswrite are comparing it to the libraries listed below
- A toolkit for NGS analysis with Python☆14Updated 2 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆46Updated 6 months ago
- Tools to handle IMC data☆23Updated 2 years ago
- Single-Cell Clustering Assessment Framework☆97Updated last year
- Porting DESeq2 into python via rpy2☆68Updated last year
- ☆39Updated last month
- ☆41Updated 5 months ago
- Doublet detection in single-cell RNA-seq data.☆88Updated last week
- A simple pythonic interface to biomart.☆55Updated 4 years ago
- The Self-Assembling-Manifold (SAM) algorithm.☆41Updated 6 months ago
- A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA seq…☆57Updated 3 months ago
- Filtering of Poison noise on a single-cell RNA-seq UMI count matrix☆69Updated last year
- Python package to perform normalization and variance-stabilization of single-cell data☆23Updated 2 years ago
- ☆55Updated 6 years ago
- R implementation of MULTI-seq sample classification workflow☆61Updated last year
- Quasilinear data representations for single-cell omics data analysis☆42Updated last year
- Multi-omics factor analysis v2☆39Updated 3 months ago
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆28Updated 3 years ago
- Fast visualization tool for large-scale and high dimensional single-cell data☆68Updated last year
- ☆34Updated 8 months ago
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 3 years ago
- A repo with random short code snippets☆41Updated 5 years ago
- User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins☆59Updated 7 months ago
- ☆50Updated last year
- pycistarget is a python module to perform motif enrichment analysis in sets of regions with different tools and identify high confidence …☆15Updated last week
- ☆66Updated 9 months ago
- pseudobulking on an AnnData object☆28Updated last year
- Tools which deal with multiple single cell measurements☆21Updated last month
- A method to rapidly assess cell type identity using both functional and random gene sets☆36Updated last week
- Scanpy use cases.☆79Updated 4 years ago