Alternatives and similar repositories for AD_regulome_analysis

Users that are interested in AD_regulome_analysis are comparing it to the libraries listed below

• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆39Updated 5 years ago
• buenrostrolab / FigR
  Functional Inference of Gene Regulation
  ☆49Updated last year
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆23Updated last year
• chensujun / scRNA
  ☆32Updated 4 years ago
• JunyueCaoLab / EasySci
  Computational pipeline to process EasySci-RNA data.
  ☆21Updated last year
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆76Updated 3 months ago
• veltenlab / CloneTracer
  This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…
  ☆26Updated last year
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆32Updated last year
• RegnerM2015 / scBreast_scRNA_scATAC_2024
  Repository to store code used for the analyses presented in "Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic …
  ☆19Updated 5 months ago
• jeongdo801 / scNOVA
  scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis
  ☆11Updated 2 years ago
• Teichlab / PanGIAtlas
  Integration of gut cell atlases
  ☆29Updated 2 weeks ago
• haoshijie13 / LISTA
  Codes used in LISTA project.
  ☆14Updated last year
• BernsteinLab / Myeloid-Glioma
  Scripts used to perform the analyses to study the Biology of Myeloid Cells in Glioma Microenvironments
  ☆21Updated 6 months ago
• youqiongye / CRC_scRNAseq
  ☆47Updated 3 years ago
• jiang-junyao / IReNA
  R package IReNA
  ☆28Updated last year
• gabrielakinker / CCLE_heterogeneity
  ☆60Updated last year
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆32Updated 4 years ago
• Teichlab / SKM_ageing_atlas
  ☆12Updated last year
• Single-Cell-Genomics-Group-CNAG-CRG / TonsilAtlas
  Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)
  ☆34Updated 10 months ago
• WanluLiuLab / scAtlasVAE
  ☆39Updated 4 months ago
• snehamitra / SCARlink
  ☆59Updated 4 months ago
• xryanglab / SCASL
  single-cell clustering based on alternative splicing landscapes
  ☆23Updated last year
• dpeerlab / pdac-progression
  ☆10Updated 2 years ago
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆28Updated 3 years ago
• guangchunhan / LUAD_Code
  ☆24Updated 2 years ago
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆38Updated 2 years ago
• TianLab-Bioinfo / scMAGIC
  A robust and accurate cell type classifier for single cell RNA-seq data
  ☆17Updated 2 years ago
• colomemaria / epiAneufinder
  R package to detect breakpoints and assign somies to scATAC-seq data
  ☆42Updated this week
• beyondpie / CEMBA_wmb_snATAC
  Whole mouse brain snATAC seq analysis
  ☆27Updated 6 months ago
• teresho4 / scRNA-seq_atlas_Hs_PBMC_aging
  ☆17Updated 2 years ago