Total copy number inference from single-cell RNA and ATAC sequing with cell clustering
☆12Oct 31, 2024Updated last year
Alternatives and similar repositories for rcongas
Users that are interested in rcongas are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of Pyro models and functions to infer CNA from scRNA-seq data☆11Aug 14, 2023Updated 3 years ago
- Get a desktop alert when a nearby car is available☆12Sep 24, 2025Updated 11 months ago
- Reverse engineering my vacuum robot☆11Dec 11, 2020Updated 5 years ago
- Custom PDF report layouts to export ggplot2 visualizations☆11Mar 1, 2019Updated 7 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Inferring selection in cancer sequencing data using ABC and population based simulations☆11Jan 31, 2021Updated 5 years ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆27Aug 31, 2026Updated last week
- a variational autoencoder method for clustering single-cell mutation data☆11Apr 17, 2024Updated 2 years ago
- Model-based tumour subclonal deconvolution using population genetics☆36Dec 2, 2025Updated 9 months ago
- Interpretable Analysis of Histological WSIs☆18Jan 30, 2026Updated 7 months ago
- ☆18Oct 22, 2024Updated last year
- Code for major analyses in "Spatially resolved multi-omics of human metabolic dysfunction-associated steatotic liver disease" paper by Zi…☆16Nov 25, 2025Updated 9 months ago
- Clinical oncology tumor board decision support system made by the Decider project.☆16Apr 22, 2026Updated 4 months ago
- ☆17Dec 29, 2025Updated 8 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Fit generalized linear models in python.☆28Mar 6, 2023Updated 3 years ago
- Git repo for CONIPHER tree building☆27Mar 20, 2025Updated last year
- Paired Insertion Counting for snATAC-seq data☆19Aug 17, 2026Updated 3 weeks ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Jan 30, 2026Updated 7 months ago
- single cell analysis of treatment naive and treated human PDAC☆26May 27, 2022Updated 4 years ago
- a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.☆72Jul 9, 2026Updated last month
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆23Dec 1, 2024Updated last year
- OncoPrint visualization☆23Jun 8, 2022Updated 4 years ago
- Implementation of MaSigPro for scRNA-Seq Data☆20Jul 31, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Charting spatial ligand-target activity using Renoir (ligand-taRgEt iNteractions acrOss spatIal topogRaphy)☆22Jun 26, 2026Updated 2 months ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Dec 1, 2025Updated 9 months ago
- ☆10Jul 23, 2020Updated 6 years ago
- Code for RNA-seq gene coexpression analysis☆10Dec 23, 2021Updated 4 years ago
- Run multiple Pipeline5 instances at once☆11Jun 6, 2025Updated last year
- ☆14Feb 26, 2024Updated 2 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆20Oct 25, 2024Updated last year
- ☆10Sep 27, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆10Apr 20, 2023Updated 3 years ago
- ☆14Apr 4, 2023Updated 3 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆13Oct 23, 2024Updated last year
- Python wrapper for Caterva. Still preliminary.☆21Apr 10, 2023Updated 3 years ago
- NeoDisc - A computational pipeline for the identification and prioritization of immunogenic tumor-specific HLA-I and -II antigens from ge…☆14Oct 8, 2024Updated last year
- ☆18Sep 23, 2024Updated last year
- Repository of the TRanslational ONCOlogy library, which includes various algorithms (such as CAPRESE and CAPRI) and the Pipeline for Canc…☆30Apr 7, 2026Updated 5 months ago