Alternatives and similar repositories for BS831

Users that are interested in BS831 are comparing it to the libraries listed below

• crazyhottommy / scRNA-seq-workshop-Fall-2019
  Harvard FAS informatics scRNAseq workshop website
  ☆38Updated 6 years ago
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 3 years ago
• jgamache014 / snRNA-seq-workflow
  Human brain, >200,000 nuclei
  ☆24Updated 4 years ago
• XSLiuLab / tumor-immunogenicity-score
  TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
  ☆32Updated 4 years ago
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆30Updated last year
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆23Updated 3 months ago
• TransBioInfoLab / TNBC_analysis
  Code to reproduce TNBC analysis and figures
  ☆24Updated 3 years ago
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆59Updated 10 months ago
• liuhong-jia / scAnno
  ☆25Updated 4 months ago
• showteeth / GEfetch2R
  GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
  ☆37Updated 5 months ago
• jokergoo / cola
  A General Framework for Consensus Partitioning
  ☆63Updated 8 months ago
• satijalab / azimuth-references
  ☆24Updated 4 months ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated 2 weeks ago
• cansysbio / ConsensusTME
  ConsensusTME Gene Sets and R Script
  ☆39Updated last year
• Core-Bioinformatics / bulkAnalyseR
  ☆28Updated last year
• oganm / homologene
  An r package that works as a wrapper to homologene
  ☆46Updated last year
• bhklab / Xeva
  XEnograft Visualization & Analysis
  ☆11Updated last month
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆22Updated 4 years ago
• shenorrLabTRDF / bseqsc
  Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline
  ☆46Updated 2 years ago
• icbi-lab / immune_deconvolution_benchmark
  Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…
  ☆43Updated 5 years ago
• BUStools / BUS_notebooks_R
  R vignettes for processing BUS format single-cell RNA-seq files
  ☆20Updated 5 years ago
• Sarah145 / CCPlotR
  An R package for visualising cell-cell interactions
  ☆43Updated last year
• andygxzeng / AMLHierarchies
  Analysis notebooks and data for AML hierarchies paper
  ☆16Updated 2 years ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated 2 weeks ago
• MahnoorNGondal / scRNA-seq-ICB-cohorts
  This repository contained single-cell RNA-seq datasets with ICB treated patients
  ☆12Updated 10 months ago
• kevinblighe / scDataviz
  scDataviz: single cell dataviz and downstream analyses
  ☆63Updated 4 years ago
• randel / MIND
  Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution
  ☆47Updated 2 years ago
• neurogenomics / reanalysis_Mathys_2019
  A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…
  ☆14Updated last year
• bigbioinformatics / single_cell_rna_seq_workshop
  repository for the single cell RNA-Seq workshop
  ☆30Updated 4 years ago
• RMolania / TCGA_PanCancer_UnwantedVariation
  ☆48Updated last year