Weighted Nearest Neighbors Analysis implemented in Python (pyWNN)
☆21Oct 7, 2021Updated 4 years ago
Alternatives and similar repositories for pyWNN
Users that are interested in pyWNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 4 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- COSMOS is a computational tool crafted to overcome the challenges associated with integrating spatially resolved multi-omics data. This …☆15Nov 12, 2024Updated last year
- The Dagstuhl Format for Assembly☆13Oct 16, 2017Updated 8 years ago
- ☆16Sep 13, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An end-to-end computational pipeline for large Perturb-seq screens☆16Jul 27, 2026Updated 2 weeks ago
- Scripts for building computational models of gene regulation with tensorflow☆12Jan 21, 2020Updated 6 years ago
- ☆12Sep 7, 2023Updated 2 years ago
- ☆19Dec 15, 2023Updated 2 years ago
- Skip the peaks and expose RNA-binding in CLIP data☆10Updated this week
- R integration for edlib, a C/C++ library for pairwise sequence alignment using edit distance (Levenshtein distance).☆11Jul 20, 2025Updated last year
- ☆17Updated this week
- ☆19Oct 21, 2024Updated last year
- MGcount github repository☆14Jan 19, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆19Mar 21, 2024Updated 2 years ago
- Notebook and examples related to La Manno and Gyllborg et al. 2016☆17Mar 4, 2017Updated 9 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Dec 8, 2021Updated 4 years ago
- Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.☆22Aug 28, 2025Updated 11 months ago
- Dimensionality-reduction and classification for morphology and electrophysiology☆12Sep 23, 2024Updated last year
- ☆24Jul 27, 2026Updated 2 weeks ago
- ☆10Oct 15, 2025Updated 10 months ago
- Network Reverse Engineering through AP inference of Mutual Information☆90Mar 6, 2023Updated 3 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆47Sep 3, 2025Updated 11 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆53Apr 8, 2024Updated 2 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆12Aug 10, 2023Updated 3 years ago
- Fast Exact Spike Inference Via L0 Optimization☆16Jun 10, 2020Updated 6 years ago
- Reusable tools for working with next-generation sequencing (NGS) data☆12Oct 7, 2024Updated last year
- ☆20May 14, 2025Updated last year
- ACTIONet single-cell analysis framework☆47Sep 16, 2024Updated last year
- Tools for correcting single cell barcodes for various scATAC-seq techniques and creating fragment files and spltting BAM files per cluste…☆29Updated this week
- A collection of visualizations for genomics related information for use with Jupyter notebooks.☆10Feb 28, 2022Updated 4 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆61May 4, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Helper tools for popscle☆22Apr 21, 2023Updated 3 years ago
- ☆10Mar 19, 2020Updated 6 years ago
- Lineage Tracing by Integrating Mutation and Transcriptomic data☆13Jun 16, 2020Updated 6 years ago
- ☆35Jan 17, 2025Updated last year
- Particle dynamics and simulated annealing for chromosome structure calculation☆30Mar 15, 2024Updated 2 years ago
- ☆23Jul 31, 2018Updated 8 years ago
- ChIA-PIPE: A fully automated pipeline for comprehensive ChIA-PET data analysis and visualization☆29Aug 13, 2021Updated 5 years ago