Weighted Nearest Neighbors Analysis implemented in Python (pyWNN)
☆21Oct 7, 2021Updated 4 years ago
Alternatives and similar repositories for pyWNN
Users that are interested in pyWNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 4 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- COSMOS is a computational tool crafted to overcome the challenges associated with integrating spatially resolved multi-omics data. This …☆14Nov 12, 2024Updated last year
- The Dagstuhl Format for Assembly☆13Oct 16, 2017Updated 8 years ago
- ☆16Sep 13, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- An end-to-end computational pipeline for large Perturb-seq screens☆15Apr 25, 2025Updated last year
- Scripts for building computational models of gene regulation with tensorflow☆12Jan 21, 2020Updated 6 years ago
- ☆12Sep 7, 2023Updated 2 years ago
- ☆19Dec 15, 2023Updated 2 years ago
- Skip the peaks and expose RNA-binding in CLIP data☆10Jul 10, 2026Updated 2 weeks ago
- R integration for edlib, a C/C++ library for pairwise sequence alignment using edit distance (Levenshtein distance).☆11Jul 20, 2025Updated last year
- ☆16Apr 7, 2026Updated 3 months ago
- ☆19Oct 21, 2024Updated last year
- ☆19Mar 21, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Dec 8, 2021Updated 4 years ago
- Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.☆21Aug 28, 2025Updated 10 months ago
- Dimensionality-reduction and classification for morphology and electrophysiology☆12Sep 23, 2024Updated last year
- ☆23Updated this week
- ☆10Oct 15, 2025Updated 9 months ago
- Network Reverse Engineering through AP inference of Mutual Information☆89Mar 6, 2023Updated 3 years ago
- Seqscope codes☆11Nov 28, 2021Updated 4 years ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆53Apr 8, 2024Updated 2 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆12Aug 10, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Fast Exact Spike Inference Via L0 Optimization☆16Jun 10, 2020Updated 6 years ago
- Reusable tools for working with next-generation sequencing (NGS) data☆12Oct 7, 2024Updated last year
- ☆20May 14, 2025Updated last year
- ACTIONet single-cell analysis framework☆46Sep 16, 2024Updated last year
- Tools for correcting single cell barcodes for various scATAC-seq techniques and creating fragment files and spltting BAM files per cluste…☆29Apr 1, 2026Updated 3 months ago
- A collection of visualizations for genomics related information for use with Jupyter notebooks.☆10Feb 28, 2022Updated 4 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆61May 4, 2022Updated 4 years ago
- Helper tools for popscle☆22Apr 21, 2023Updated 3 years ago
- ☆10Mar 19, 2020Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Lineage Tracing by Integrating Mutation and Transcriptomic data☆13Jun 16, 2020Updated 6 years ago
- ☆35Jan 17, 2025Updated last year
- Particle dynamics and simulated annealing for chromosome structure calculation☆30Mar 15, 2024Updated 2 years ago
- ☆23Jul 31, 2018Updated 7 years ago
- ChIA-PIPE: A fully automated pipeline for comprehensive ChIA-PET data analysis and visualization☆29Aug 13, 2021Updated 4 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆84Jun 9, 2022Updated 4 years ago
- Primary RNA sequence model☆42May 20, 2024Updated 2 years ago